ENST00000395454.6 SCAF11
Information
- Transcript ID
- ENST00000395454.6
- Genome
- hg38
- Position
- chr12:45,954,734-45,990,584
- Strand
- -
- CDS length
- 234
- Amino acid length
- 78
- Gene symbol
- SCAF11
- Gene type
- protein-coding
- Gene description
- SR-related CTD associated factor 11
- Gene Entrez Gene ID
- 9169
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
4 | 45,954,734 | 45,956,192 |
3 | 45,961,700 | 45,961,857 |
2 | 45,964,107 | 45,964,188 |
1 | 45,990,353 | 45,990,584 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
4 | CDS | 45,956,178 | 45,956,192 |
3 | CDS | 45,961,700 | 45,961,857 |
2 | CDS | 45,964,107 | 45,964,167 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr12 | 46,348,517 | 46,384,367 | Link |
CDS sequence
ATGAAGAAGAAAACTGTATGTACCCTAAATATGGGAGATAAGAAGTATGAAGACATGGAAGGTGAAGAAAACGGAGATAATACTATTTCCACTGGTCTGTTGTACAGTGAGGCTGACAGATGCCCAATATGTCTTAATTGTCTATTAGAAAAGGAAGTTGGTTTTCCAGAAAGCTGTAATCATGTCTTCTGTATGACTTGTATTCTTAAATGGGCAGAGAGGAGCTATCTATAA
Amino sequence
MKKKTVCTLNMGDKKYEDMEGEENGDNTISTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAERSYL*