ENST00000679401.1 TCTN1
Information
- Transcript ID
- ENST00000679401.1
- Genome
- hg38
- Position
- chr12:110,614,128-110,630,228
- Strand
- +
- CDS length
- 678
- Amino acid length
- 226
- Gene symbol
- TCTN1
- Gene type
- protein-coding
- Gene description
- tectonic family member 1
- Gene Entrez Gene ID
- 79600
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 110,614,128 | 110,614,463 |
| 2 | 110,626,362 | 110,626,492 |
| 3 | 110,628,767 | 110,630,228 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 110,614,183 | 110,614,463 |
| 2 | CDS | 110,626,362 | 110,626,492 |
| 3 | CDS | 110,628,767 | 110,629,032 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 111,051,933 | 111,068,033 | Link |
CDS sequence
ATGAGGCCGCGAGGTCTCCCGCCGCTCCTGGTGGTGCTCCTGGGCTGCTGGGCCTCCGTGAGCGCCCAGACCGATGCCACCCCGGCGGTGACGACAGAGGGCCTCAACTCCACCGAGGCAGCCCTGGCCACCTTCGGAACTTTCCCGTCGACCAGGCCCCCCGGGACTCCCAGGGCTCCAGGGCCCTCCTCCGGCCCCAGGCCTACCCCAGTCACGGACGGTGGGTACCATGTGCCAGCTCCTGGAGTCCACAGTGATCCAACCTCAAGGGGACAGCCCCGGGGCGACAGCCAGTTTTGTAGTCAAAAAGCAGTCATCTATTCATTGAATTTTACAGCAAACCCACCTCAAAGAGTATTTGAACTTGTTGACCAGATTAATCCATCTATTTTCTGCATTCATATTACAAACTATAAACCTGCATTATCCTTTATTAATCCAGAAGTACCTGATGAAAACAATTTTGATACATTGATGAAAACATCTGATGGTTTTACATTGAATGCTGAATCATATGTTTCCTTCACAACCAAACTGGATATTCCTACTGCTGCTAAATATGAGGTGAGCCTGAACTTGATTGATTCTTTTCATCCCATCACAAATATCTTTCCTTGTAAGTTAATTTTCAAGGTTACCAGGAAAACTGGGTTCCTTGAGACAGAGTTGATATTATAG
Amino sequence
MRPRGLPPLLVVLLGCWASVSAQTDATPAVTTEGLNSTEAALATFGTFPSTRPPGTPRAPGPSSGPRPTPVTDGGYHVPAPGVHSDPTSRGQPRGDSQFCSQKAVIYSLNFTANPPQRVFELVDQINPSIFCIHITNYKPALSFINPEVPDENNFDTLMKTSDGFTLNAESYVSFTTKLDIPTAAKYEVSLNLIDSFHPITNIFPCKLIFKVTRKTGFLETELIL*