ENST00000380025.8 NDEL1
Information
- Transcript ID
- ENST00000380025.8
- Genome
- hg38
- Position
- chr17:8,435,900-8,468,160
- Strand
- +
- CDS length
- 810
- Amino acid length
- 270
- Gene symbol
- NDEL1
- Gene type
- protein-coding
- Gene description
- nudE neurodevelopment protein 1 like 1
- Gene Entrez Gene ID
- 81565
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 8,435,900 | 8,436,045 |
| 2 | 8,444,260 | 8,444,357 |
| 3 | 8,445,711 | 8,445,864 |
| 4 | 8,446,754 | 8,446,902 |
| 5 | 8,448,550 | 8,448,686 |
| 6 | 8,450,780 | 8,450,953 |
| 7 | 8,454,796 | 8,454,887 |
| 8 | 8,466,930 | 8,468,160 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 8,444,272 | 8,444,357 |
| 3 | CDS | 8,445,711 | 8,445,864 |
| 4 | CDS | 8,446,754 | 8,446,902 |
| 5 | CDS | 8,448,550 | 8,448,686 |
| 6 | CDS | 8,450,780 | 8,450,953 |
| 7 | CDS | 8,454,796 | 8,454,887 |
| 8 | CDS | 8,466,930 | 8,466,947 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 8,339,218 | 8,371,478 | Link |
CDS sequence
ATGGATGGTGAAGATATACCAGATTTTTCAAGTTTAAAGGAGGAAACTGCTTATTGGAAGGAACTTTCCTTGAAGTATAAGCAAAGCTTCCAGGAAGCTCGGGATGAGCTAGTTGAATTCCAGGAAGGAAGCAGAGAATTAGAAGCAGAGTTGGAGGCACAATTAGTACAGGCTGAACAAAGAAATAGAGACTTGCAGGCTGATAACCAAAGACTGAAATATGAAGTGGAGGCATTAAAGGAGAAGCTAGAGCATCAATATGCACAGAGCTATAAGCAGGTCTCAGTGTTAGAAGATGATTTAAGTCAGACTCGGGCCATTAAGGAGCAGTTGCATAAGTATGTGAGAGAGCTGGAGCAGGCCAACGACGACCTGGAGCGAGCCAAAAGGGCAACAATAGTTTCACTGGAAGACTTTGAACAAAGGCTAAACCAGGCCATTGAACGAAATGCATTTTTAGAAAGTGAACTTGATGAAAAGGAATCTTTGTTGGTCTCTGTACAGAGGTTAAAGGATGAAGCAAGAGATTTAAGGCAAGAACTAGCAGTTCGGGAAAGACAACAGGAAGTAACTAGAAAGTCGGCTCCTAGCTCTCCAACTCTAGACTGTGAAAAGATGGACTCCGCCGTCCAAGCATCACTTTCTTTGCCAGCTACCCCTGTTGGCAAAGGAACGGAGAACACTTTTCCTTCACCGAAAGCTATACCAAATGGTTTTGGTACCAGTCCACTAACTCCCTCTGCTAGGATATCAGCACTAAACATCGTGGGGGATCTCTTACGGAAAGTAGGGGGCAGTAAACGGCTTTGA
Amino sequence
MDGEDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQASLSLPATPVGKGTENTFPSPKAIPNGFGTSPLTPSARISALNIVGDLLRKVGGSKRL*