ENST00000244040.4 RAB22A
Information
- Transcript ID
- ENST00000244040.4
- Genome
- hg38
- Position
- chr20:58,309,715-58,367,507
- Strand
- +
- CDS length
- 585
- Amino acid length
- 195
- Gene symbol
- RAB22A
- Gene type
- protein-coding
- Gene description
- RAB22A, member RAS oncogene family
- Gene Entrez Gene ID
- 57403
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 58,309,715 | 58,310,012 |
2 | 58,311,043 | 58,311,122 |
3 | 58,343,718 | 58,343,799 |
4 | 58,353,273 | 58,353,344 |
5 | 58,353,432 | 58,353,538 |
6 | 58,354,156 | 58,354,265 |
7 | 58,359,606 | 58,367,507 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 58,309,977 | 58,310,012 |
2 | CDS | 58,311,043 | 58,311,122 |
3 | CDS | 58,343,718 | 58,343,799 |
4 | CDS | 58,353,273 | 58,353,344 |
5 | CDS | 58,353,432 | 58,353,538 |
6 | CDS | 58,354,156 | 58,354,265 |
7 | CDS | 58,359,606 | 58,359,703 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr20 | 56,884,771 | 56,942,563 | Link |
CDS sequence
ATGGCGCTGAGGGAGCTCAAAGTGTGTCTGCTCGGGGATACAGGTGTAGGTAAATCGAGTATTGTGTGGCGGTTTGTGGAAGACAGTTTTGATCCAAACATCAACCCAACAATAGGGGCATCTTTTATGACCAAGACTGTCCAGTACCAAAATGAGCTACATAAATTCCTAATCTGGGATACAGCTGGACAAGAACGATTTCGTGCCTTAGCACCAATGTACTATCGAGGGTCGGCTGCAGCTATAATCGTTTATGATATCACAAAAGAAGAGACATTTTCAACATTAAAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGCCATTGCAGGAAATAAATGTGATCTTATCGATGTAAGAGAAGTCATGGAGAGAGATGCAAAGGACTACGCCGACTCTATTCATGCAATTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACATAAATGAACTCTTTATAGAAATTAGTCGAAGAATTCCATCCACTGACGCCAACCTGCCATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGCTGCTGCTGA
Amino sequence
MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKGFKLRRQPSEPKRSCC*