ENST00000392911.6 PARPBP

Information
Transcript ID
ENST00000392911.6
Genome
hg38
Position
chr12:102,120,247-102,196,429
Strand
+
CDS length
1,497
Amino acid length
499
Gene symbol
PARPBP
Gene type
protein-coding
Gene description
PARP1 binding protein
Gene Entrez Gene ID
55010
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 102,120,247 102,120,286
2 102,123,886 102,124,041
3 102,148,235 102,148,463
4 102,153,869 102,153,976
5 102,164,438 102,164,608
6 102,165,729 102,165,883
7 102,175,483 102,175,666
8 102,178,592 102,178,770
9 102,182,549 102,182,627
10 102,195,312 102,195,447
11 102,195,951 102,196,429
CDS
Exon number Type Start Stop
3 CDS 102,148,320 102,148,463
4 CDS 102,153,869 102,153,976
5 CDS 102,164,438 102,164,608
6 CDS 102,165,729 102,165,883
7 CDS 102,175,483 102,175,666
8 CDS 102,178,592 102,178,770
9 CDS 102,182,549 102,182,627
10 CDS 102,195,312 102,195,447
11 CDS 102,195,951 102,196,291
Other genome
Genome Chromosome Start End Links
hg19 chr12 102,514,025 102,590,207 Link
CDS sequence
ATGGACGTGACTGACCATTATGAGGACGTTAGGAAGATTTATGATGATTTCTTGAAGAACAGTAATATGTTAGATCTGATTGATGTTTATCAAAAATGTAGGGCTTTGACTTCTAATTGTGAAAATTATAACACAGTATCTCCTAGTCAACTACTGGATTTTCTGTCTGGCAAACAGTATGCAGTAGGTGATGAAACTGATCTTTCTATACCAACATCACCAACAAGTAAATACAACCGTGATAATGAAAAGGTGCAGCTGCTAGCAAGGAAAATTATCTTTTCATATTTAAATCTGCTAGTGAATTCAAAGAATGACCTGGCTGTGGCTTATATTCTCAATATTCCTGATAGAGGACTAGGAAGAGAAGCCTTCACTGATTTGAAACATGCTGCTCGAGAGAAACAAATGTCTATCTTTTTGGTGGCCACGTCTTTTATTAGAACAATAGAGCTTGGAGGGAAAGGATATGCACCACCACCATCAGATCCTTTAAGGACACATGTAAAGGGATTGTCTAATTTTATTAATTTCATTGACAAATTAGATGAGATTCTTGGAGAAATACCAAACCCAAGCATTGCAGGGGGTCAAATACTGTCAGTGATAAAGATGCAACTGATTAAAGGCCAAAACAGCAGGGATCCTTTTTGCAAAGCAATAGAGGAAGTTGCTCAGGATTTGGATTTGAGGATTAAAAATATTATCAATTCTCAAGAAGGTGTTGTAGCTCTTAGCACCACTGACATCAGTCCTGCTCGGCCAAAATCTCATGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGCAGAGCTTTTATATGATGAGGAAAACACAATCCATCATCATGGAACGTCTATTCTTACACTTTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCATCTGTGTGTCAATGCAAGAGAAAAAAATTAAGATGAAGCAAACTTTAATTAGATCCCAATTTGCTTGTACTTATAAAGATGACTACATGATAAGCAAGGATAATTGGAATAATGTTAATTTAGCATCAAAGCCTTTGTGTGTTCTTTACATGGAAAATGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGACAGAAGTAAAAATGAAAAAGTATCAAGAAAATCAACCAGTCAGACAGGAAATAAAAGCTCAAAAAGGAAACAGGTGGATTTGGATGGTGAAAATATTCTCTGTGATAATAGAAATGAACCACCTCAACATAAAAATGCTAAAATACCTAAGAAATCAAATGATTCACAGAATAGATTGTACGGCAAACTAGCTAAAGTAGCAAAAAGTAATAAATGTACTGCCAAGGACAAGTTGATTTCTGGCCAGGCAAAGTTAACTCAGTTTTTTAGACTATAA
Amino sequence
MDVTDHYEDVRKIYDDFLKNSNMLDLIDVYQKCRALTSNCENYNTVSPSQLLDFLSGKQYAVGDETDLSIPTSPTSKYNRDNEKVQLLARKIIFSYLNLLVNSKNDLAVAYILNIPDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAPPPSDPLRTHVKGLSNFINFIDKLDEILGEIPNPSIAGGQILSVIKMQLIKGQNSRDPFCKAIEEVAQDLDLRIKNIINSQEGVVALSTTDISPARPKSHAINHGTAYCGRDTVKALLVLLDEEAANAPTKNKAELLYDEENTIHHHGTSILTLFRSPTQVNNSIKPLRERICVSMQEKKIKMKQTLIRSQFACTYKDDYMISKDNWNNVNLASKPLCVLYMENDLSEGVNPSVGRSTIGTSFGNVHLDRSKNEKVSRKSTSQTGNKSSKRKQVDLDGENILCDNRNEPPQHKNAKIPKKSNDSQNRLYGKLAKVAKSNKCTAKDKLISGQAKLTQFFRL*