ENST00000536551.6 STMND1
Information
- Transcript ID
- ENST00000536551.6
- Genome
- hg38
- Position
- chr6:17,102,050-17,131,378
- Strand
- +
- CDS length
- 831
- Amino acid length
- 277
- Gene symbol
- STMND1
- Gene type
- protein-coding
- Gene description
- stathmin domain containing 1
- Gene Entrez Gene ID
- 401236
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 17,102,050 | 17,102,338 |
2 | 17,114,962 | 17,115,139 |
3 | 17,120,607 | 17,120,758 |
4 | 17,129,112 | 17,129,243 |
5 | 17,130,594 | 17,131,378 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 17,102,258 | 17,102,338 |
2 | CDS | 17,114,962 | 17,115,139 |
3 | CDS | 17,120,607 | 17,120,758 |
4 | CDS | 17,129,112 | 17,129,243 |
5 | CDS | 17,130,594 | 17,130,881 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr6 | 17,102,281 | 17,131,609 | Link |
CDS sequence
ATGGGCTGTGGACCTTCCCAACCTGCTGAAGACCGGAGACGTGTACGCGCGCCCAAGAAGGGCTGGAAAGAGGAATTCAAGGCTGATGTCAGTGTGCCTCATACTGGGGAAAATTGCAGCCCCCGGATGGAAGCTGCTCTGACCAAGAATACTGTGGACATTGCAGAAGGCCTGGAACAAGTCCAGATGGGAAGCTTACCTGGAACCATTTCAGAAAATTCTCCATCTCCTAGTGAAAGAAACAGACGAGTAAATTCAGACCTAGTGACCAATGGATTAATCAATAAACCCCAATCCCTAGAGAGTCGAGAGCGACAGAAGTCATCAGATATCCTGGAGGAACTAATTGTTCAAGGAATTATACAAAGCCACAGCAAAGTATTTAGAAATGGAGAATCATATGATGTCACGTTGACTACGACTGAGAAGCCATTGAGAAAGCCACCTTCCAGACTGAAAAAACTCAAGATCAAAAAGCAAGTGAAGGATTTCACAATGAAGGACATCGAGGAGAAGATGGAGGCTGCCGAGGAGCGCAGGAAGACTAAAGAAGAAGAAATAAGAAAAAGGCTACGGAGTGACCGACTTTTGCCTTCAGCCAATCACTCAGATTCAGCTGAATTAGATGGGGCCGAGGTTGCATTTGCCAAAGGACTTCAAAGGGTGAGGTCTGCTGGATTTGAACCATCTGACCTGCAGGGAGGAAAACCATTGAAGAGGAAGAAGAGTAAATGTGATGCAACCTTGATTGATAGAAACGAAAGTGATGAAAGTTTTGGGGTCGTGGAGTCAGACATGTCCTACAACCAAGCAGATGACATAGTCTACTAA
Amino sequence
MGCGPSQPAEDRRRVRAPKKGWKEEFKADVSVPHTGENCSPRMEAALTKNTVDIAEGLEQVQMGSLPGTISENSPSPSERNRRVNSDLVTNGLINKPQSLESRERQKSSDILEELIVQGIIQSHSKVFRNGESYDVTLTTTEKPLRKPPSRLKKLKIKKQVKDFTMKDIEEKMEAAEERRKTKEEEIRKRLRSDRLLPSANHSDSAELDGAEVAFAKGLQRVRSAGFEPSDLQGGKPLKRKKSKCDATLIDRNESDESFGVVESDMSYNQADDIVY*