ENST00000646419.2 PMP22
Information
- Transcript ID
- ENST00000646419.2
- Genome
- hg38
- Position
- chr17:15,229,817-15,265,325
- Strand
- -
- CDS length
- 357
- Amino acid length
- 119
- Gene symbol
- PMP22
- Gene type
- protein-coding
- Gene description
- peripheral myelin protein 22
- Gene Entrez Gene ID
- 5376
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 15,229,817 | 15,231,080 |
| 5 | 15,235,219 | 15,235,284 |
| 4 | 15,239,471 | 15,239,611 |
| 3 | 15,259,094 | 15,259,193 |
| 2 | 15,260,650 | 15,260,761 |
| 1 | 15,265,154 | 15,265,325 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 15,235,247 | 15,235,284 |
| 4 | CDS | 15,239,471 | 15,239,611 |
| 3 | CDS | 15,259,094 | 15,259,193 |
| 2 | CDS | 15,260,650 | 15,260,727 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 15,133,134 | 15,168,642 | Link |
CDS sequence
ATGCTCCTCCTGTTGCTGAGTATCATCGTCCTCCACGTCGCGGTGCTGGTGCTGCTGTTCGTCTCCACGATCGTCAGCCAATGGATCGTGGGCAATGGACACGCAACTGATCTCTGGCAGAACTGTAGCACCTCTTCCTCAGGAAATGTCCACCACTGTTTCTCATCATCACCAAACGAATGGCTGCAGTCTGTCCAGGCCACCATGATCCTGTCGATCATCTTCAGCATTCTGTCTCTGTTCCTGTTCTTCTGCCAACTCTTCACCCTCACCAAGGGGGGCAGGTTTTACATCACTGGAATCTTCCAAATTCTTGCTGAATCAAACTCAAGTCAAATGTGTGGTTACCGGGATTAA
Amino sequence
MLLLLLSIIVLHVAVLVLLFVSTIVSQWIVGNGHATDLWQNCSTSSSGNVHHCFSSSPNEWLQSVQATMILSIIFSILSLFLFFCQLFTLTKGGRFYITGIFQILAESNSSQMCGYRD*