ENST00000467789.5 SSR3
Information
- Transcript ID
- ENST00000467789.5
- Genome
- hg38
- Position
- chr3:156,542,821-156,555,149
- Strand
- -
- CDS length
- 597
- Amino acid length
- 199
- Gene symbol
- SSR3
- Gene type
- protein-coding
- Gene description
- signal sequence receptor subunit 3
- Gene Entrez Gene ID
- 6747
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 156,542,821 | 156,543,269 |
| 4 | 156,544,308 | 156,544,439 |
| 3 | 156,548,866 | 156,549,003 |
| 2 | 156,553,655 | 156,553,781 |
| 1 | 156,554,957 | 156,555,149 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 156,543,203 | 156,543,269 |
| 4 | CDS | 156,544,308 | 156,544,439 |
| 3 | CDS | 156,548,866 | 156,549,003 |
| 2 | CDS | 156,553,655 | 156,553,781 |
| 1 | CDS | 156,554,957 | 156,555,089 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr3 | 156,260,610 | 156,272,938 | Link |
CDS sequence
ATGGCTCCTAAAGGCAGCTCCAAACAGCAGTCTGAGGAGGACCTGCTCCTGCAGGATTTCAGCCGCAATCTCTCGGCCAAGTCCTCCGCGCTCTTCTTCGGAAACGCGTTCATCGTGTCTGCCATCCCCATCTGGTTATACTGGCGAATATGGCATATGGATCTTATTCAGTCTGCTGTTTTGTATAGTGTGATGACCCTAGTAAGCACATATTTGGTAGCCTTTGCATACAAGAATGTGAAATTTGTTCTCAAGCACAAAGTAGCACAGAAGAGGGAGGATGCTGTTTCCAAAGAAGTGACTCGAAAACTTTCTGAAGCTGATAATAGAAAGATGTCTCGGAAGGAGAAAGATGAAAGGTTTGACTCCTGTTTAAAGTATGGCCATCATAAAAGGGGAATCTTGTGGAAGAAGAATGAAGTTGCTGATTATGAAGCTACAACATTTTCCATCTTCTATAACAACACTCTGTTCCTGGTCGTGGTCATTGTTGCTTCCTTCTTCATATTGAAGAACTTCAACCCCACAGTGAACTACATATTGTCCATAAGTGCTTCATCAGGACTCATCGCCCTCCTGTCTACTGGCTCCAAATAG
Amino sequence
MAPKGSSKQQSEEDLLLQDFSRNLSAKSSALFFGNAFIVSAIPIWLYWRIWHMDLIQSAVLYSVMTLVSTYLVAFAYKNVKFVLKHKVAQKREDAVSKEVTRKLSEADNRKMSRKEKDERFDSCLKYGHHKRGILWKKNEVADYEATTFSIFYNNTLFLVVVIVASFFILKNFNPTVNYILSISASSGLIALLSTGSK*