ENST00000511166.1 CCDC169-SOHLH2

Information
Transcript ID
ENST00000511166.1
Genome
hg38
Position
chr13:36,168,794-36,297,842
Strand
-
CDS length
1,509
Amino acid length
503
Gene symbol
CCDC169-SOHLH2
Gene type
protein-coding
Gene description
CCDC169-SOHLH2 readthrough
Gene Entrez Gene ID
100526761
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 36,168,794 36,169,054
15 36,170,531 36,170,787
14 36,173,692 36,173,810
13 36,174,476 36,174,567
12 36,174,722 36,174,869
11 36,189,946 36,190,056
10 36,191,795 36,191,894
9 36,193,621 36,193,725
8 36,193,806 36,193,867
7 36,201,879 36,202,093
6 36,227,348 36,227,381
5 36,248,606 36,248,682
4 36,253,803 36,253,856
3 36,254,045 36,254,143
2 36,283,592 36,283,702
1 36,297,637 36,297,842
CDS
Exon number Type Start Stop
16 CDS 36,169,034 36,169,054
15 CDS 36,170,531 36,170,787
14 CDS 36,173,692 36,173,810
13 CDS 36,174,476 36,174,567
12 CDS 36,174,722 36,174,869
11 CDS 36,189,946 36,190,056
10 CDS 36,191,795 36,191,894
9 CDS 36,193,621 36,193,725
8 CDS 36,193,806 36,193,867
7 CDS 36,201,879 36,202,093
6 CDS 36,227,348 36,227,381
5 CDS 36,248,606 36,248,682
4 CDS 36,253,803 36,253,856
3 CDS 36,254,045 36,254,143
2 CDS 36,283,592 36,283,606
Other genome
Genome Chromosome Start End Links
hg19 chr13 36,742,931 36,871,979 Link
CDS sequence
ATGGAAACTCTTCAGGAATCCTTAAACACATTACTTAAACAGCTAGAAGAAGAAAAGAAGACTCTTGAAAGTCAAGTGAAATACTATGCACTTAAACTGGAACAAGAATCAAAGGCTTACCAGAAGATCAACAATGAACGCCGTACATACCTAGCTGAAATGTCTCAGGGTTCTGGTTTACATCAAGTTTCTAAAAGGCAACAGGTGGATCAACTGCCTAGGATGCAAGAGAATCTAGTGAAAACCCTCCTCTTAAAAGAAGAATTGGACCCTTTAAAGGCAAAAATAGACATCTTATTAGTTGGAGATGTCACTGTGGGCTACCTGGCTGATACTGTACAGAAACTATTTGCAAACATAGCAGAAGTCACCATCACCATCAGTGACACGAAGGAGGCAGCAGCGCTTTTGGATGATTGCATATTCAACATGGTTCTCTTGAAGGTGCCTTCTTCACTAAGTGCCGAGGAGCTGGAAGCCATCAAGTTAATTAGATTTGGCAAAAAGAAAAATACACATTCACTGTTTGTTTTTATAATCCCTGAAAATTTTAAAGGTTGTATTTCAGGGCATGGAATGGATATTGCTTTAACTGAACCACTGACAATGGAAAAAATGAGTAATGTGGTAAAATACTGGACAACATGTCCCTCAAACACTGTTAAGACTGAAAACGCAACTGGGCCTGAAGAACTTGGATTGCCCCTGCAGAGGTCCTACAGCGAACACCTGGGATATTTTCCTACTGATCTATTTGCCTGCTCTGAATCTTTAAGGAATGGCAATGGGCTTGAATTAAATGCTTCGTTGTCAGAGTTCGAGAAAAACAAAAAGATCTCTCTTCTTCATTCAAGCAAGGAAAAACTAAGAAGGGAAAGAATCAAATATTGCTGTGAGCAGCTGCGTACTCTCTTGCCGTATGTAAAAGGGAGAAAGAATGATGCGGCTTCAGTTCTTGAGGCAACAGTTGATTATGTGAAATATATCCGGGAGAAAATCTCTCCAGCCGTTATGGCCCAGATTACAGAAGCACTTCAGAGCAACATGAGGTTTTGTAAGAAACAACAAACACCCATTGAGCTGTCTCTCCCAGGCACTGTCATGGCACAGCGGGAAAACAGTGTGATGAGCACTTACTCCCCTGAGAGAGGGCTCCAATTCCTGACTAATACGTGCTGGAATGGGTGCTCCACTCCTGATGCAGAGAGCTCCTTGGATGAAGCTGTGAGAGTTCCATCAAGCTCCGCCTCAGAGAATGCTATTGGTGATCCATATAAAACTCACATTTCCAGTGCAGCGCTGTCTCTGAATTCCTTGCATACTGTCAGATATTATTCTAAAGTCACCCCTTCCTACGATGCAACTGCTGTAACAAATCAGAACATTTCAATTCATTTACCTTCAGCCATGCCCCCGGTCTCAAAGCTTCTCCCTCGGCACTGCACTTCTGGGTTGGGCCAGACGTGCACTACACATCCCAACTGTCTGCAACAGTTTTGGGCGTATTAA
Amino sequence
METLQESLNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQGSGLHQVSKRQQVDQLPRMQENLVKTLLLKEELDPLKAKIDILLVGDVTVGYLADTVQKLFANIAEVTITISDTKEAAALLDDCIFNMVLLKVPSSLSAEELEAIKLIRFGKKKNTHSLFVFIIPENFKGCISGHGMDIALTEPLTMEKMSNVVKYWTTCPSNTVKTENATGPEELGLPLQRSYSEHLGYFPTDLFACSESLRNGNGLELNASLSEFEKNKKISLLHSSKEKLRRERIKYCCEQLRTLLPYVKGRKNDAASVLEATVDYVKYIREKISPAVMAQITEALQSNMRFCKKQQTPIELSLPGTVMAQRENSVMSTYSPERGLQFLTNTCWNGCSTPDAESSLDEAVRVPSSSASENAIGDPYKTHISSAALSLNSLHTVRYYSKVTPSYDATAVTNQNISIHLPSAMPPVSKLLPRHCTSGLGQTCTTHPNCLQQFWAY*