ENST00000547431.5 PPP1R1A
Information
- Transcript ID
- ENST00000547431.5
- Genome
- hg38
- Position
- chr12:54,575,387-54,588,516
- Strand
- -
- CDS length
- 462
- Amino acid length
- 154
- Gene symbol
- PPP1R1A
- Gene type
- protein-coding
- Gene description
- protein phosphatase 1 regulatory inhibitor subunit 1A
- Gene Entrez Gene ID
- 5502
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 54,575,387 | 54,577,542 |
| 5 | 54,580,376 | 54,580,392 |
| 4 | 54,580,944 | 54,581,050 |
| 3 | 54,583,211 | 54,583,248 |
| 2 | 54,584,260 | 54,584,320 |
| 1 | 54,588,405 | 54,588,516 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 54,577,388 | 54,577,542 |
| 5 | CDS | 54,580,376 | 54,580,392 |
| 4 | CDS | 54,580,944 | 54,581,050 |
| 3 | CDS | 54,583,211 | 54,583,248 |
| 2 | CDS | 54,584,260 | 54,584,320 |
| 1 | CDS | 54,588,405 | 54,588,488 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 54,969,171 | 54,982,300 | Link |
CDS sequence
ATGGAGCAAGACAACAGCCCCCGAAAGATCCAGTTCACGGTCCCGCTGCTGGAGCCGCACCTTGACCCCGAGGCGGCGGAGCAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACCGGATCCCCAACCCACATCTCAAGAAACTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATACCACCACTGGATTCCAAGGGAGCCAACTCGGTCTGAGAGAGGAGGAGGGACTGGGGGACAGAAGAGCGTGGGAGGATTTCCCTGCTCCACCCACACTTTGGCTCCATTCTATGTCTTCACTCGCTCCATTTTACTGCTCAAAAGGGGAGAGAGAATGTCGCATCCACTGGAGCCCAGAGACGACCCAACAAAGATGCCATGA
Amino sequence
MEQDNSPRKIQFTVPLLEPHLDPEAAEQIRRRRPTPATLVLTSDQSSPEIDEDRIPNPHLKKLQNASLKLTREAVRNPAQKNPQPIYHHWIPREPTRSERGGGTGGQKSVGGFPCSTHTLAPFYVFTRSILLLKRGERMSHPLEPRDDPTKMP*