ENST00000316073.3 RPTN

Information
Transcript ID
ENST00000316073.3
Genome
hg38
Position
chr1:152,153,595-152,159,228
Strand
-
CDS length
2,355
Amino acid length
785
Gene symbol
RPTN
Gene type
protein-coding
Gene description
repetin
Gene Entrez Gene ID
126638
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 152,153,595 152,156,960
2 152,157,752 152,157,909
1 152,159,184 152,159,228
CDS
Exon number Type Start Stop
3 CDS 152,154,744 152,156,960
2 CDS 152,157,752 152,157,889
Other genome
Genome Chromosome Start End Links
hg19 chr1 152,126,071 152,131,704 Link
CDS sequence
ATGGCTCAACTCCTGAATAGCATACTCAGTGTGATTGACGTATTCCACAAATATGCCAAAGGGAATGGGGACTGTGCCTTACTATGCAAGGAAGAGTTGAAACAACTGCTCTTGGCTGAGTTTGGAGACATCCTCCAGAGACCAAATGACCCAGAGACTGTGGAAACCATCTTGAACCTCTTAGATCAAGACCGAGATGGACATATTGATTTTCATGAGTACCTCTTGTTGGTGTTCCAGTTGGTCCAAGCCTGCTATCATAAGCTAGACAATAAGTCACATGGAGGCAGGACCTCACAGCAAGAAAGGGGGCAGGAAGGAGCACAAGACTGTAAGTTCCCAGGAAACACAGGCAGACAACACAGACAGAGGCACGAGGAAGAAAGGCAGAACTCCCACCACAGTCAGCCTGAGAGACAAGACGGAGATTCCCACCATGGTCAGCCTGAGAGACAAGACAGAGATTCCCACCATGGTCAGTCTGAGAAACAAGACAGAGATTCCCACCACAGTCAGCCTGAGAGACAAGACAGAGATTCTCACCACAATCAGTCTGAGAGACAAGACAAGGATTTCAGCTTTGATCAGTCAGAGAGACAAAGTCAAGACTCCAGCTCTGGTAAAAAAGTGAGTCACAAATCTACCAGTGGCCAGGCTAAATGGCAGGGACATATCTTTGCCTTAAATCGGTGTGAAAAACCAATTCAGGATTCTCATTATGGTCAGTCTGAAAGACATACACAACAATCTGAAACACTTGGACAAGCCTCTCACTTTAACCAGACAAATCAACAGAAATCAGGCTCTTATTGTGGACAGTCTGAGAGGCTAGGTCAGGAATTAGGCTGTGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTACGGTCAGACGGACAGACAAGACCAGAGTTATCATTATGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTACAGTCAGACGGACAGACAAGGCCAGAGTTCCCACTACAGTCAGCCAGACAGACAAGGTCAGAGTTCCCACTATGGTCAAATGGACAGAAAAGGCCAGTGTTATCATTATGATCAGACAAACAGACAAGGCCAGGGTTCCCACTACAGTCAACCAAACAGACAAGGTCAGAGTTCCCACTATGGTCAGCCAGACACACAAGATCAGAGTTCTCACTATGGTCAGACAGACAGACAAGACCAAAGTTCTCACTATGGTCAGACAGAGAGACAAGGCCAGAGTTCCCACTACAGTCAGATGGACCGACAAGGCCAGGGTTCTCACTACGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTATGGTCAGCCAGACAGACAAGGCCAGAATTCCCACTATGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTATGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTACAGTCAGCCAGACAAACAAGGCCAGAGTTCCCACTATGGTAAGATAGACAGACAAGACCAGAGTTATCATTATGGTCAGCCAGACGGACAAGGCCAAAGTTCCCACTATGGTCAGACAGACAGACAAGGCCAGAGTTTCCACTATGGTCAGCCAGACAGACAAGGCCAGAGTTCCCACTACAGTCAGATGGACAGACAAGGCCAGAGTTCCCACTATGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTACGGTCAGACAGACAGACAAGGCCAGAGCTATCATTATGGTCAGACAGACAGACAAGGCCAGAGTTCCCACTATATTCAATCACAGACTGGGGAAATACAAGGGCAAAATAAGTACTTCCAAGGGACTGAAGGAACAAGAAAAGCCTCTTATGTTGAACAATCAGGAAGATCAGGGAGGCTAAGTCAACAGACTCCAGGACAGGAAGGGTACCAAAACCAGGGACAGGGATTCCAGTCTAGGGACTCACAGCAGAACGGCCACCAGGTATGGGAGCCTGAAGAGGATAGCCAACATCACCAACACAAACTCTTAGCACAAATCCAACAAGAAAGACCACTTTGTCACAAAGGGAGAGACTGGCAATCATGCAGTAGTGAGCAGGGCCACAGACAGGCCCAGACCAGGCAGAGTCATGGTGAGGGGCTGAGCCACTGGGCAGAGGAAGAGCAGGGCCATCAAACTTGGGATAGACACAGCCATGAGAGTCAGGAAGGTCCATGTGGGACACAGGACAGGCGAACCCATAAAGATGAGCAGAACCATCAGAGACGAGACAGACAAACCCATGAACATGAGCAGAGCCATCAGAGACGAGACAGGCAAACCCATGAAGACAAGCAGAACCGTCAGAGACGAGACAGGCAAACCCATGAAGACGAGCAGAACCATCAGAGATGA
Amino sequence
MAQLLNSILSVIDVFHKYAKGNGDCALLCKEELKQLLLAEFGDILQRPNDPETVETILNLLDQDRDGHIDFHEYLLLVFQLVQACYHKLDNKSHGGRTSQQERGQEGAQDCKFPGNTGRQHRQRHEEERQNSHHSQPERQDGDSHHGQPERQDRDSHHGQSEKQDRDSHHSQPERQDRDSHHNQSERQDKDFSFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSETLGQASHFNQTNQQKSGSYCGQSERLGQELGCGQTDRQGQSSHYGQTDRQDQSYHYGQTDRQGQSSHYSQTDRQGQSSHYSQPDRQGQSSHYGQMDRKGQCYHYDQTNRQGQGSHYSQPNRQGQSSHYGQPDTQDQSSHYGQTDRQDQSSHYGQTERQGQSSHYSQMDRQGQGSHYGQTDRQGQSSHYGQPDRQGQNSHYGQTDRQGQSSHYGQTDRQGQSSHYSQPDKQGQSSHYGKIDRQDQSYHYGQPDGQGQSSHYGQTDRQGQSFHYGQPDRQGQSSHYSQMDRQGQSSHYGQTDRQGQSSHYGQTDRQGQSYHYGQTDRQGQSSHYIQSQTGEIQGQNKYFQGTEGTRKASYVEQSGRSGRLSQQTPGQEGYQNQGQGFQSRDSQQNGHQVWEPEEDSQHHQHKLLAQIQQERPLCHKGRDWQSCSSEQGHRQAQTRQSHGEGLSHWAEEEQGHQTWDRHSHESQEGPCGTQDRRTHKDEQNHQRRDRQTHEHEQSHQRRDRQTHEDKQNRQRRDRQTHEDEQNHQR*