ENST00000528852.5 CNIH2
Information
- Transcript ID
- ENST00000528852.5
- Genome
- hg38
- Position
- chr11:66,278,190-66,284,193
- Strand
- +
- CDS length
- 459
- Amino acid length
- 153
- Gene symbol
- CNIH2
- Gene type
- protein-coding
- Gene description
- cornichon family AMPA receptor auxiliary protein 2
- Gene Entrez Gene ID
- 254263
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 66,278,190 | 66,278,537 |
| 2 | 66,282,259 | 66,282,327 |
| 3 | 66,282,733 | 66,282,780 |
| 4 | 66,283,035 | 66,283,147 |
| 5 | 66,283,248 | 66,284,193 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 66,278,457 | 66,278,537 |
| 2 | CDS | 66,282,259 | 66,282,327 |
| 3 | CDS | 66,282,733 | 66,282,780 |
| 4 | CDS | 66,283,035 | 66,283,147 |
| 5 | CDS | 66,283,248 | 66,283,395 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 66,045,661 | 66,051,664 | Link |
CDS sequence
ATGGCGTTCACCTTCGCCGCGTTCTGCTACATGCTCACCCTGGTGCTGTGCGCCTCCCTCATCTTCTTTGTCATCTGGCACATCATAGCCTTTGATGAGCTGCGGACCGACTTCAAGAACCCCATCGACCAGGGGAACCCTGCGCGGGCACGCGAGCGTTTAAAAAACATCGAACGCATCTGCTGCCTCCTGAGGAAGCTGGTGGTCCCAGAATACTCCATCCACGGCCTCTTCTGTCTGATGTTTCTGTGTGCAGCAGAGTGGGTGACCCTGGGCCTCAACATCCCCCTCCTCTTCTACCACCTCTGGAGGTACTTCCACCGTCCTGCAGATGGCTCTGAGGTCATGTATGATGCGGTCTCCATCATGAATGCTGACATTCTCAACTACTGCCAGAAGGAGTCCTGGTGCAAACTTGCCTTCTACCTGCTCTCCTTCTTCTATTACCTGTACAGGTGA
Amino sequence
MAFTFAAFCYMLTLVLCASLIFFVIWHIIAFDELRTDFKNPIDQGNPARARERLKNIERICCLLRKLVVPEYSIHGLFCLMFLCAAEWVTLGLNIPLLFYHLWRYFHRPADGSEVMYDAVSIMNADILNYCQKESWCKLAFYLLSFFYYLYR*