ENST00000409417.6 PDLIM2

Information
Transcript ID
ENST00000409417.6
Genome
hg38
Position
chr8:22,580,475-22,594,298
Strand
+
CDS length
1,059
Amino acid length
353
Gene symbol
PDLIM2
Gene type
protein-coding
Gene description
PDZ and LIM domain 2
Gene Entrez Gene ID
64236
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 22,580,475 22,580,697
2 22,581,379 22,581,530
3 22,584,821 22,584,890
4 22,585,017 22,585,162
5 22,585,321 22,585,399
6 22,589,298 22,589,374
7 22,589,596 22,589,741
8 22,591,551 22,591,668
9 22,593,733 22,594,298
CDS
Exon number Type Start Stop
1 CDS 22,580,605 22,580,697
2 CDS 22,581,379 22,581,530
3 CDS 22,584,821 22,584,890
4 CDS 22,585,017 22,585,162
5 CDS 22,585,321 22,585,399
6 CDS 22,589,298 22,589,374
7 CDS 22,589,596 22,589,741
8 CDS 22,591,551 22,591,668
9 CDS 22,593,733 22,593,910
Other genome
Genome Chromosome Start End Links
hg19 chr8 22,437,988 22,451,811 Link
CDS sequence
ATGGCGTTGACGGTGGATGTGGCCGGGCCAGCGCCCTGGGGCTTCCGTATCACAGGGGGCAGGGATTTCCACACGCCCATCATGGTGACTAAGGTGGCCGAGCGGGGCAAAGCCAAGGACGCTGACCTCCGGCCTGGAGACATAATCGTGGCCATCAACGGGGAAAGCGCGGAGGGCATGCTGCATGCCGAGGCCCAGAGCAAGATCCGCCAGAGCCCCTCGCCCCTGCGGCTGCAGCTGGACCGGTCTCAGGCTACGTCTCCAGGGCAGACCAATGGGGACAGCTCCTTGGAAGTGCTGGCGACTCGCTTCCAGGGCTCCGTGAGGACATACACTGAGAGTCAGTCCTCCTTAAGGTCCTCCTACTCCAGCCCAACCTCCCTCAGCCCGAGGGCCGGCAGCCCCTTCTCACCACCACCCTCTAGCAGCTCCCTCACTGGAGAGGCAGCCATCAGCCGCAGCTTCCAGAGTCTGGCATGTTCCCCGGGCCTCCCCGCTGCTGACCGCCTGTCCTACTCAGGCCGCCCTGGAAGCCGACAGGCCGGCCTCGGCCGCGCTGGCGACTCGGCGGTGCTGGTGCTGCCGCCTTCCCCGGGCCCTCGTTCCTCCAGGCCCAGCATGGACTCGGAAGGGGGAAGCCTCCTCCTGGACGAGGACTCGGAAGTCTTCAAGATGCTGCAGGAAAATCGCGAGGGACGGGCGGCCCCCCGACAGTCCAGCTCCTTTCGGCTCTTGCAGGAAGCCCTGGAGGCTGAGGAGAGAGGTGGCACGCCAGCCTTCTTGCCCAGCTCACTGAGCCCCCAGTCCTCCCTGCCCGCCTCCAGGGCCCTGGCCACCCCTCCCAAGCTCCACACTTGTGAGAAGTGCAGTACCAGCATCGCGAACCAGGCTGTGCGCATCCAGGAGGGCCGGTACCGCCACCCCGGCTGCTACACCTGTGCCGACTGTGGGCTGAACCTGAAGATGCGCGGGCACTTCTGGGTGGGTGACGAGCTGTACTGTGAGAAGCATGCCCGCCAGCGCTACTCCGCACCTGCCACCCTCAGCTCTCGGGCCTGA
Amino sequence
MALTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRSQATSPGQTNGDSSLEVLATRFQGSVRTYTESQSSLRSSYSSPTSLSPRAGSPFSPPPSSSSLTGEAAISRSFQSLACSPGLPAADRLSYSGRPGSRQAGLGRAGDSAVLVLPPSPGPRSSRPSMDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*