ENST00000409418.9 FCHSD2

Information
Transcript ID
ENST00000409418.9
Genome
hg38
Position
chr11:72,836,745-73,142,318
Strand
-
CDS length
2,223
Amino acid length
741
Gene symbol
FCHSD2
Gene type
protein-coding
Gene description
FCH and double SH3 domains 2
Gene Entrez Gene ID
9873
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
20 72,836,745 72,838,874
19 72,840,877 72,840,959
18 72,841,454 72,841,583
17 72,842,621 72,842,841
16 72,843,151 72,843,328
15 72,843,449 72,843,532
14 72,849,755 72,849,889
13 72,867,865 72,868,026
12 72,887,470 72,887,574
11 72,889,829 72,889,945
10 72,902,543 72,902,638
9 72,921,828 72,921,950
8 72,984,088 72,984,216
7 72,985,062 72,985,116
6 72,988,964 72,989,097
5 73,000,990 73,001,134
4 73,015,809 73,015,885
3 73,083,695 73,083,740
2 73,140,031 73,140,128
1 73,141,857 73,142,318
CDS
Exon number Type Start Stop
20 CDS 72,838,791 72,838,874
19 CDS 72,840,877 72,840,959
18 CDS 72,841,454 72,841,583
17 CDS 72,842,621 72,842,841
16 CDS 72,843,151 72,843,328
15 CDS 72,843,449 72,843,532
14 CDS 72,849,755 72,849,889
13 CDS 72,867,865 72,868,026
12 CDS 72,887,470 72,887,574
11 CDS 72,889,829 72,889,945
10 CDS 72,902,543 72,902,638
9 CDS 72,921,828 72,921,950
8 CDS 72,984,088 72,984,216
7 CDS 72,985,062 72,985,116
6 CDS 72,988,964 72,989,097
5 CDS 73,000,990 73,001,134
4 CDS 73,015,809 73,015,885
3 CDS 73,083,695 73,083,740
2 CDS 73,140,031 73,140,128
1 CDS 73,141,857 73,141,877
Other genome
Genome Chromosome Start End Links
hg19 chr11 72,547,790 72,853,363 Link
CDS sequence
ATGCAGCCGCCGCCGAGGAAGGTGAAAGTTACACAAGAACTGAAAAACATTCAAGTTGAGCAGATGACAAAACTTCAAGCCAAACATCAAGCAGAATGTGATTTGCTTGAAGATATGAGGACATTCAGTCAGAAGAAGGCTGCTATTGAAAGAGAGTATGCACAGGGTATGCAGAAGTTGGCTAGTCAATACCTGAAGAGAGATTGGCCTGGAGTAAAAGCTGATGATCGGAATGATTACAGGAGCATGTATCCCGTTTGGAAATCTTTTCTCGAGGGAACAATGCAGGTAGCCCAGTCTCGGATGAATATATGTGAAAACTATAAAAACTTCATTTCTGAGCCTGCAAGGACAGTGAGAAGCTTAAAAGAACAGCAACTAAAAAGGTGTGTGGACCAGTTGACAAAGATCCAAACTGAATTACAAGAGACAGTGAAAGATTTAGCTAAAGGCAAAAAGAAATACTTTGAGACTGAACAGATGGCTCATGCAGTACGAGAGAAAGCTGACATCGAGGCAAAATCTAAACTTAGTCTTTTTCAATCAAGAATCAGTTTACAGAAGGCAAGTGTAAAGTTAAAAGCCCGGCGATCTGAGTGTAATTCCAAAGCTACCCACGCAAGGAATGATTATCTTCTTACCCTAGCGGCAGCAAATGCACATCAGGATCGCTACTATCAAACAGATTTAGTTAACATTATGAAGGCTCTTGATGGAAATGTGTATGATCATCTCAAGGATTATTTAATAGCCTTCAGCCGGACTGAGCTAGAAACATGCCAAGCTGTGCAGAACACATTCCAGTTTTTATTAGAAAACTCCAGCAAGGTGGTCCGGGACTACAATCTTCAGCTGTTTTTGCAAGAAAACGCTGTATTTCACAAACCCCAGCCCTTCCAGTTCCAGCCTTGTGACAGTGATACTAGCCGACAGTTAGAATCAGAAACTGGGACCACAGAGGAGCACAGTCTAAATAAGGAAGCTCGAAAATGGGCCACACGTGTGGCACGTGAGCATAAAAACATTGTTCACCAACAACGGGTTCTAAATGATCTGGAGTGTCATGGAGCTGCTGTATCAGAACAAAGCCGAGCAGAGCTAGAACAGAAAATAGATGAAGCTAGAGAAAATATTCGTAAAGCAGAGATAATTAAATTGAAAGCTGAAGCCCGGTTGGACCTGCTAAAGCAGATTGGTGTTTCTGTGGACACATGGCTAAAGAGTGCCATGAACCAAGTAATGGAAGAACTGGAAAATGAGCGATGGGCCCGCCCTCCTGCAGTGACCAGTAATGGCACTTTACACTCGCTTAATGCAGATACCGAAAGAGAAGAAGGCGAAGAGTTTGAAGATAACATGGATGTTTTCGATGACAGCAGTTCCAGCCCTTCTGGCACCTTAAGAAATTATCCACTCACCTGCAAAGTTGTTTATTCCTACAAGGCTTCTCAACCAGATGAGTTGACCATTGAGGAACATGAGGTGTTAGAAGTGATTGAAGATGGAGATATGGAAGACTGGGTAAAGGCTCGAAATAAAGTTGGCCAAGTGGGTTATGTGCCAGAAAAGTACCTACAGTTTCCCACCTCGAACAGCCTCCTGAGCATGCTGCAGTCCCTGGCCGCTTTGGACAGTCGGTCACACACGTCCAGCAATTCCACGGAAGCAGAACTCGTTTCAGGCAGCCTCAACGGAGATGCCAGTGTATGTTTTGTGAAAGCACTTTATGATTATGAGGGCCAGACAGATGATGAGTTATCTTTTCCTGAGGGAGCAATAATCCGTATCTTGAACAAAGAAAACCAAGATGATGATGGCTTCTGGGAAGGGGAATTCAATGGGCGTATTGGAGTTTTCCCATCGGTGCTAGTGGAAGAACTTTCAGCCTCAGAAAATGGTGACACTCCATGGATGAGAGAGATTCAGATCTCTCCTTCCCCCAAGCCACACGCCTCCCTGCCTCCACTGCCGTTGTACGACCAGCCTCCCAGCAGCCCCTACCCCAGCCCAGATAAGAGGAGCTCCCTGTACTTTCCCCGGTCTCCTTCAGCAAACGAAAAAAGCCTTCATGCTGAGTCACCAGGATTCTCACAGGCATCAAGGCATACTCCTGAGACCTCATATGGCAAACTGCGACCTGTCCGGGCAGCTCCCCCTCCACCTACACAGAATCACCGAAGGCCAGCAGAGAAGATTGAAGATGTGGAAATCACACTGGTGTGA
Amino sequence
MQPPPRKVKVTQELKNIQVEQMTKLQAKHQAECDLLEDMRTFSQKKAAIEREYAQGMQKLASQYLKRDWPGVKADDRNDYRSMYPVWKSFLEGTMQVAQSRMNICENYKNFISEPARTVRSLKEQQLKRCVDQLTKIQTELQETVKDLAKGKKKYFETEQMAHAVREKADIEAKSKLSLFQSRISLQKASVKLKARRSECNSKATHARNDYLLTLAAANAHQDRYYQTDLVNIMKALDGNVYDHLKDYLIAFSRTELETCQAVQNTFQFLLENSSKVVRDYNLQLFLQENAVFHKPQPFQFQPCDSDTSRQLESETGTTEEHSLNKEARKWATRVAREHKNIVHQQRVLNDLECHGAAVSEQSRAELEQKIDEARENIRKAEIIKLKAEARLDLLKQIGVSVDTWLKSAMNQVMEELENERWARPPAVTSNGTLHSLNADTEREEGEEFEDNMDVFDDSSSSPSGTLRNYPLTCKVVYSYKASQPDELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTSNSLLSMLQSLAALDSRSHTSSNSTEAELVSGSLNGDASVCFVKALYDYEGQTDDELSFPEGAIIRILNKENQDDDGFWEGEFNGRIGVFPSVLVEELSASENGDTPWMREIQISPSPKPHASLPPLPLYDQPPSSPYPSPDKRSSLYFPRSPSANEKSLHAESPGFSQASRHTPETSYGKLRPVRAAPPPPTQNHRRPAEKIEDVEITLV*