ENST00000572441.5 ABR
Information
- Transcript ID
- ENST00000572441.5
- Genome
- hg38
- Position
- chr17:1,005,010-1,031,802
- Strand
- -
- CDS length
- 462
- Amino acid length
- 154
- Gene symbol
- ABR
- Gene type
- protein-coding
- Gene description
- ABR activator of RhoGEF and GTPase
- Gene Entrez Gene ID
- 29
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 1,005,010 | 1,005,148 |
| 4 | 1,011,937 | 1,011,985 |
| 3 | 1,012,688 | 1,012,797 |
| 2 | 1,013,105 | 1,013,164 |
| 1 | 1,031,598 | 1,031,802 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 1,005,050 | 1,005,148 |
| 4 | CDS | 1,011,937 | 1,011,985 |
| 3 | CDS | 1,012,688 | 1,012,797 |
| 2 | CDS | 1,013,105 | 1,013,164 |
| 1 | CDS | 1,031,598 | 1,031,741 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 908,250 | 935,042 | Link |
CDS sequence
ATGACCGACGTCCTGCCCCAGCCCGACTGCAGCCCGAAGGCGGGGCGCGAACCCCTGGCGCTGGAGGAGTCGGGGAGCAAGCGCCCCCCCAACACCGGCGCCCGGCTCTGGGGCCGCGTGCGCAACAAGCTGCTCCGAAACAAGCTGGACCCACAAACCGTGGAGACCAAGAACTGGCACACGGACGTGATTGAGATGAACGGGATCAAAGTGGAATTTTCCATGAAATTCACCAGCCGAGATATGAGCCTGAAGAGGACCCCGTCCAAAAAGCAGACCGGCGTCTTCGGTGTGAAGATCAGCGTGGTGACGAAGCGGGAGCGCTCCAAGGTGCCCTACATCGTCCGGCAGTGTGTGGAGGAGGCGGTCAGGCTGCTGAGGAAACACCACAGGCTGAACGGGGGAGGAATGCACATGCCACGCTGGGTGTCCCGGGTCGCGGGGAGGCAGCTCAGCTCTTAG
Amino sequence
MTDVLPQPDCSPKAGREPLALEESGSKRPPNTGARLWGRVRNKLLRNKLDPQTVETKNWHTDVIEMNGIKVEFSMKFTSRDMSLKRTPSKKQTGVFGVKISVVTKRERSKVPYIVRQCVEEAVRLLRKHHRLNGGGMHMPRWVSRVAGRQLSS*