ENST00000264828.4 COL5A3

Information
Transcript ID
ENST00000264828.4
Genome
hg38
Position
chr19:9,959,561-10,010,504
Strand
-
CDS length
5,238
Amino acid length
1,746
Gene symbol
COL5A3
Gene type
protein-coding
Gene description
collagen type V alpha 3 chain
Gene Entrez Gene ID
50509
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
67 9,959,561 9,960,557
66 9,960,651 9,960,890
65 9,962,819 9,962,887
64 9,966,314 9,966,426
63 9,966,536 9,966,746
62 9,967,347 9,967,400
61 9,967,904 9,967,939
60 9,968,026 9,968,079
59 9,968,385 9,968,492
58 9,968,675 9,968,728
57 9,969,349 9,969,402
56 9,969,575 9,969,682
55 9,969,869 9,969,922
54 9,970,622 9,970,675
53 9,970,975 9,971,028
52 9,971,205 9,971,258
51 9,972,919 9,973,026
50 9,973,570 9,973,623
49 9,973,756 9,973,809
48 9,973,919 9,973,972
47 9,974,171 9,974,224
46 9,974,301 9,974,408
45 9,976,558 9,976,611
44 9,977,229 9,977,282
43 9,977,365 9,977,472
42 9,977,594 9,977,701
41 9,978,574 9,978,627
40 9,978,891 9,978,980
39 9,979,132 9,979,239
38 9,979,364 9,979,417
37 9,979,839 9,979,892
36 9,979,994 9,980,047
35 9,980,648 9,980,692
34 9,980,806 9,980,859
33 9,981,088 9,981,132
32 9,982,065 9,982,118
31 9,985,842 9,985,895
30 9,986,315 9,986,422
29 9,986,553 9,986,606
28 9,986,714 9,986,758
27 9,989,124 9,989,177
26 9,989,322 9,989,366
25 9,989,469 9,989,522
24 9,991,610 9,991,654
23 9,991,788 9,991,841
22 9,992,004 9,992,048
21 9,992,827 9,992,880
20 9,993,023 9,993,067
19 9,993,380 9,993,433
18 9,993,619 9,993,672
17 9,993,753 9,993,806
16 9,995,564 9,995,617
15 9,996,066 9,996,119
14 9,996,206 9,996,262
13 9,996,433 9,996,516
12 9,996,615 9,996,689
11 9,997,371 9,997,433
10 9,997,984 9,998,025
9 9,998,102 9,998,149
8 10,001,524 10,001,670
7 10,001,768 10,001,881
6 10,003,565 10,003,714
5 10,004,041 10,004,145
4 10,005,558 10,005,714
3 10,005,796 10,005,985
2 10,006,073 10,006,231
1 10,010,298 10,010,504
CDS
Exon number Type Start Stop
67 CDS 9,960,411 9,960,557
66 CDS 9,960,651 9,960,890
65 CDS 9,962,819 9,962,887
64 CDS 9,966,314 9,966,426
63 CDS 9,966,536 9,966,746
62 CDS 9,967,347 9,967,400
61 CDS 9,967,904 9,967,939
60 CDS 9,968,026 9,968,079
59 CDS 9,968,385 9,968,492
58 CDS 9,968,675 9,968,728
57 CDS 9,969,349 9,969,402
56 CDS 9,969,575 9,969,682
55 CDS 9,969,869 9,969,922
54 CDS 9,970,622 9,970,675
53 CDS 9,970,975 9,971,028
52 CDS 9,971,205 9,971,258
51 CDS 9,972,919 9,973,026
50 CDS 9,973,570 9,973,623
49 CDS 9,973,756 9,973,809
48 CDS 9,973,919 9,973,972
47 CDS 9,974,171 9,974,224
46 CDS 9,974,301 9,974,408
45 CDS 9,976,558 9,976,611
44 CDS 9,977,229 9,977,282
43 CDS 9,977,365 9,977,472
42 CDS 9,977,594 9,977,701
41 CDS 9,978,574 9,978,627
40 CDS 9,978,891 9,978,980
39 CDS 9,979,132 9,979,239
38 CDS 9,979,364 9,979,417
37 CDS 9,979,839 9,979,892
36 CDS 9,979,994 9,980,047
35 CDS 9,980,648 9,980,692
34 CDS 9,980,806 9,980,859
33 CDS 9,981,088 9,981,132
32 CDS 9,982,065 9,982,118
31 CDS 9,985,842 9,985,895
30 CDS 9,986,315 9,986,422
29 CDS 9,986,553 9,986,606
28 CDS 9,986,714 9,986,758
27 CDS 9,989,124 9,989,177
26 CDS 9,989,322 9,989,366
25 CDS 9,989,469 9,989,522
24 CDS 9,991,610 9,991,654
23 CDS 9,991,788 9,991,841
22 CDS 9,992,004 9,992,048
21 CDS 9,992,827 9,992,880
20 CDS 9,993,023 9,993,067
19 CDS 9,993,380 9,993,433
18 CDS 9,993,619 9,993,672
17 CDS 9,993,753 9,993,806
16 CDS 9,995,564 9,995,617
15 CDS 9,996,066 9,996,119
14 CDS 9,996,206 9,996,262
13 CDS 9,996,433 9,996,516
12 CDS 9,996,615 9,996,689
11 CDS 9,997,371 9,997,433
10 CDS 9,997,984 9,998,025
9 CDS 9,998,102 9,998,149
8 CDS 10,001,524 10,001,670
7 CDS 10,001,768 10,001,881
6 CDS 10,003,565 10,003,714
5 CDS 10,004,041 10,004,145
4 CDS 10,005,558 10,005,714
3 CDS 10,005,796 10,005,985
2 CDS 10,006,073 10,006,231
1 CDS 10,010,298 10,010,385
Other genome
Genome Chromosome Start End Links
hg19 chr19 10,070,237 10,121,180 Link
CDS sequence
ATGGGGAACCGCCGGGACCTGGGCCAGCCGCGGGCCGGTCTCTGCCTGCTCCTGGCCGCGCTGCAGCTTCTGCCGGGGACGCAGGCCGATCCTGTGGATGTCCTGAAGGCCCTGGGTGTGCAGGGAGGCCAGGCTGGGGTCCCCGAGGGGCCTGGCTTCTGTCCCCAGAGGACTCCAGAGGGTGACCGGGCATTCAGAATTGGCCAGGCCAGCACGCTCGGCATCCCCACGTGGGAACTCTTTCCAGAAGGCCACTTTCCTGAGAACTTCTCCTTGCTGATCACCTTGCGGGGACAGCCAGCCAATCAGTCTGTCCTGCTGTCCATTTATGATGAAAGGGGTGCCCGGCAGTTGGGCCTGGCACTGGGGCCAGCGCTGGGTCTCCTAGGTGACCCCTTCCGCCCCCTCCCCCAGCAGGTCAACCTCACAGATGGCAGGTGGCACCGTGTGGCCGTCAGCATAGATGGTGAGATGGTGACCCTGGTAGCTGACTGTGAAGCTCAGCCCCCTGTTTTGGGCCATGGCCCCCGCTTCATCAGCATAGCTGGACTCACTGTGCTGGGGACCCAGGACCTTGGGGAAAAGACTTTCGAGGGAGACATTCAGGAGCTGCTGATAAGCCCAGATCCTCAGGCTGCCTTCCAGGCTTGTGAGCGGTACCTCCCCGACTGTGACAACCTGGCACCGGCAGCCACAGTGGCTCCCCAGGGTGAACCAGAAACCCCTCGTCCTCGGCGGAAGGGGAAGGGAAAAGGGAGGAAGAAAGGGCGAGGTCGCAAGGGGAAGGGCAGGAAAAAGAACAAGGAAATTTGGACCTCAAGTCCACCTCCTGACTCCGCAGAGAACCAGACCTCCACTGACATCCCCAAGACAGAGACTCCAGCTCCAAATCTGCCTCCGACCCCCACGCCTTTGGTCGTCACCTCCACTGTGACTACTGGACTCAATGCCACGATCCTAGAGAGGAGCTTGGACCCTGACAGTGGAACCGAGCTGGGGACCCTGGAGACCAAGGCAGCCAGGGAGGATGAAGAAGGAGATGATTCCACCATGGGCCCTGACTTCCGGGCAGCAGAATATCCATCTCGGACTCAGTTCCAGATCTTTCCTGGTGCTGGAGAGAAAGGAGCAAAAGGAGAGCCCGCAGTGATTGAAAAGGGGCAGCAGTTTGAGGGACCTCCAGGAGCCCCAGGACCCCAAGGGGTGGTTGGCCCCTCAGGCCCTCCCGGCCCCCCAGGATTCCCTGGCGACCCTGGTCCACCGGGCCCTGCTGGCCTCCCAGGAATCCCCGGCATTGATGGGATCCGAGGCCCACCGGGCACTGTGATCATGATGCCGTTCCAGTTTGCAGGCGGCTCCTTTAAAGGCCCCCCAGTCTCATTCCAGCAGGCCCAGGCTCAGGCAGTTCTGCAGCAGACTCAGCTCTCTATGAAAGGCCCCCCTGGTCCAGTGGGGCTCACTGGGCGCCCAGGCCCTGTGGGTCTCCCCGGGCATCCAGGTCTGAAAGGAGAGGAGGGAGCAGAAGGGCCACAGGGTCCCCGAGGCCTGCAGGGACCTCATGGACCCCCTGGCCGAGTGGGCAAGATGGGCCGCCCTGGAGCAGATGGAGCTCGGGGCCTCCCAGGGGACACTGGACCTAAGGGTGATCGTGGCTTCGATGGCCTCCCTGGGCTGCCTGGTGAGAAGGGCCAAAGGGGTGACTTTGGCCATGTGGGGCAACCCGGTCCCCCAGGAGAGGATGGTGAGAGGGGAGCAGAGGGACCTCCAGGGCCCACTGGCCAGGCTGGGGAGCCGGGTCCACGAGGACTGCTTGGCCCCAGAGGCTCTCCTGGCCCCACGGGTCGCCCGGGTGTGACTGGAATTGATGGTGCTCCTGGTGCCAAAGGCAATGTGGGTCCTCCAGGAGAACCAGGCCCTCCGGGACAGCAGGGAAACCATGGGTCCCAGGGACTCCCCGGTCCCCAGGGACTCATTGGCACTCCTGGGGAGAAGGGTCCCCCTGGAAACCCAGGAATTCCAGGCCTCCCAGGATCCGATGGCCCTCTGGGTCACCCAGGACATGAGGGCCCCACGGGAGAGAAAGGGGCTCAGGGTCCACCAGGGTCGGCAGGCCCTCCGGGCTATCCTGGACCTCGGGGAGTGAAGGGCACTTCAGGCAACCGGGGCCTCCAGGGGGAGAAAGGCGAGAAGGGAGAGGACGGCTTCCCAGGCTTCAAGGGCGATGTGGGGCTCAAAGGTGATCAGGGGAAACCCGGAGCTCCAGGTCCCCGGGGAGAGGATGGTCCTGAGGGGCCGAAGGGGCAGGCGGGGCAGGCTGGCGAGGAGGGGCCCCCAGGCTCAGCTGGGGAGAAGGGCAAGCTTGGGGTGCCAGGCCTCCCAGGTTATCCAGGACGCCCTGGACCTAAGGGATCTATTGGATTTCCCGGTCCCCTGGGACCCATAGGAGAGAAAGGGAAGTCGGGAAAGACAGGGCAGCCAGGCCTGGAAGGAGAGCGGGGACCACCAGGTTCCCGTGGAGAGAGGGGGCAACCGGGTGCCACAGGGCAACCAGGCCCCAAGGGCGATGTGGGCCAGGATGGAGCCCCTGGGATCCCTGGAGAAAAGGGCCTCCCTGGTCTGCAAGGCCCTCCAGGATTCCCTGGGCCAAAGGGCCCCCCTGGTCACCAAGGTAAAGATGGGCGACCAGGGCACCCTGGACAGAGAGGAGAACTGGGCTTCCAAGGTCAGACAGGCCCGCCTGGACCAGCTGGTGTCTTAGGCCCTCAGGGAAAGACAGGAGAAGTGGGACCTCTAGGTGAAAGGGGGCCTCCAGGCCCCCCTGGACCTCCTGGTGAACAAGGTCTTCCTGGCCTGGAAGGCAGAGAGGGGGCCAAGGGGGAACTGGGACCACCAGGACCCCTTGGGAAAGAAGGGCCAGCTGGACTCAGGGGCTTTCCCGGCCCCAAAGGGGGCCCTGGGGACCCGGGACCTACTGGCTTAAAGGGTGATAAGGGCCCCCCAGGGCCCGTGGGGGCCAATGGCTCCCCTGGTGAGCGCGGTCCTTTGGGCCCAGCAGGAGGCATTGGACTTCCTGGCCAAAGTGGCAGCGAAGGCCCCGTTGGCCCTGCAGGCAAGAAGGGGTCCCGGGGAGAACGTGGCCCCCCTGGCCCCACTGGCAAAGATGGGATCCCAGGGCCCCTGGGGCCTCTGGGACCCCCTGGAGCTGCTGGGCCTTCTGGCGAGGAAGGGGACAAGGGGGATGTGGGTGCCCCCGGACACAAGGGGAGTAAAGGCGATAAAGGAGACGCGGGCCCACCTGGACAACCAGGGATACGGGGTCCTGCAGGACACCCAGGTCCCCCGGGAGCAGACGGGGCTCAGGGGCGCCGGGGACCCCCAGGCCTCTTTGGGCAGAAAGGAGATGACGGAGTCAGAGGCTTTGTGGGGGTGATTGGCCCTCCTGGACTGCAGGGGCTGCCAGGCCCTCCGGGAGAGAAAGGGGAGGTCGGAGACGTCGGGTCCATGGGTCCCCATGGAGCTCCAGGTCCTCGGGGTCCCCAAGGCCCCACTGGATCAGAGGGCACTCCAGGGCTGCCTGGAGGAGTTGGTCAGCCAGGCGCCGTGGGTGAGAAGGGTGAGCGAGGGGACGCTGGAGACCCAGGGCCTCCAGGAGCCCCAGGCATCCCGGGGCCCAAGGGAGACATTGGTGAAAAGGGGGACTCAGGCCCATCTGGAGCTGCTGGACCCCCAGGCAAGAAAGGTCCCCCTGGAGAGGATGGAGCCAAAGGGAGCGTGGGCCCCACGGGGCTGCCCGGAGATCTAGGGCCCCCAGGAGACCCTGGAGTTTCAGGCATAGATGGTTCCCCAGGGGAGAAGGGAGACCCTGGTGATGTTGGGGGACCGGGTCCGCCTGGAGCTTCTGGGGAGCCCGGCGCCCCCGGGCCCCCCGGCAAGAGGGGTCCTTCAGGCCACATGGGTCGAGAAGGCAGAGAAGGGGAGAAAGGTGCCAAGGGGGAGCCAGGTCCTGATGGGCCCCCAGGGAGGACGGGTCCAATGGGGGCTAGAGGGCCCCCTGGACGTGTGGGGCCTGAGGGTCTTCGAGGGATCCCTGGCCCTGTGGGTGAACCAGGCCTCCTGGGAGCCCCTGGACAGATGGGCCCTCCTGGCCCCCTGGGGCCCTCTGGCCTCCCAGGGCTGAAGGGAGACACTGGCCCCAAGGGGGAAAAGGGCCACATTGGATTGATCGGTCTCATTGGCCCCCCGGGAGAAGCTGGTGAGAAAGGAGATCAGGGGTTGCCAGGCGTGCAGGGACCCCCTGGTCCCAAGGGAGACCCTGGTCCCCCTGGTCCCATTGGCTCTCTGGGCCACCCTGGGCCCCCAGGTGTGGCGGGCCCTCTAGGACAGAAAGGCTCAAAAGGGTCTCCGGGGTCCATGGGCCCCCGTGGAGACACTGGACCTGCAGGCCCACCAGGCCCCCCGGGTGCCCCTGCCGAGCTGCATGGGCTGCGCAGGCGCCGGCGCTTCGTCCCAGTCCCGCTTCCAGTCGTGGAGGGCGGCCTGGAGGAGGTGCTGGCCTCGCTCACATCGCTGAGCTTGGAGCTGGAGCAGCTGCGGCGTCCTCCCGGCACTGCGGAGCGCCCGGGCCTCGTGTGCCACGAGCTGCACCGCAACCACCCGCACCTGCCTGATGGGGAATACTGGATTGACCCCAACCAGGGCTGCGCGCGGGACTCGTTCAGGGTTTTTTGCAACTTCACGGCGGGAGGAGAGACCTGCCTCTATCCCGACAAGAAGTTTGAGATCGTGAAATTGGCCTCCTGGTCCAAGGAAAAGCCTGGAGGCTGGTATAGCACATTCCGTCGAGGGAAGAAGTTCTCCTACGTGGACGCCGACGGGTCCCCAGTGAATGTCGTGCAGCTGAACTTCCTGAAACTGCTGAGTGCCACAGCTCGCCAGAACTTCACCTACTCCTGCCAGAATGCAGCTGCCTGGCTGGACGAAGCCACGGGTGACTACAGCCACTCCGCCCGCTTCCTTGGCACCAATGGAGAGGAGCTGTCTTTCAACCAGACGACAGCAGCCACTGTCAGCGTCCCCCAGGATGGCTGCCGGCTCCGGAAAGGACAGACGAAGACCCTTTTCGAATTCAGCTCTTCTCGAGCGGGATTTCTGCCCCTGTGGGATGTGGCGGCCACTGACTTTGGCCAGACGAACCAAAAGTTTGGGTTTGAACTGGGCCCCGTCTGCTTCAGCAGCTGA
Amino sequence
MGNRRDLGQPRAGLCLLLAALQLLPGTQADPVDVLKALGVQGGQAGVPEGPGFCPQRTPEGDRAFRIGQASTLGIPTWELFPEGHFPENFSLLITLRGQPANQSVLLSIYDERGARQLGLALGPALGLLGDPFRPLPQQVNLTDGRWHRVAVSIDGEMVTLVADCEAQPPVLGHGPRFISIAGLTVLGTQDLGEKTFEGDIQELLISPDPQAAFQACERYLPDCDNLAPAATVAPQGEPETPRPRRKGKGKGRKKGRGRKGKGRKKNKEIWTSSPPPDSAENQTSTDIPKTETPAPNLPPTPTPLVVTSTVTTGLNATILERSLDPDSGTELGTLETKAAREDEEGDDSTMGPDFRAAEYPSRTQFQIFPGAGEKGAKGEPAVIEKGQQFEGPPGAPGPQGVVGPSGPPGPPGFPGDPGPPGPAGLPGIPGIDGIRGPPGTVIMMPFQFAGGSFKGPPVSFQQAQAQAVLQQTQLSMKGPPGPVGLTGRPGPVGLPGHPGLKGEEGAEGPQGPRGLQGPHGPPGRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGERGAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRPGVTGIDGAPGAKGNVGPPGEPGPPGQQGNHGSQGLPGPQGLIGTPGEKGPPGNPGIPGLPGSDGPLGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTSGNRGLQGEKGEKGEDGFPGFKGDVGLKGDQGKPGAPGPRGEDGPEGPKGQAGQAGEEGPPGSAGEKGKLGVPGLPGYPGRPGPKGSIGFPGPLGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGAPGIPGEKGLPGLQGPPGFPGPKGPPGHQGKDGRPGHPGQRGELGFQGQTGPPGPAGVLGPQGKTGEVGPLGERGPPGPPGPPGEQGLPGLEGREGAKGELGPPGPLGKEGPAGLRGFPGPKGGPGDPGPTGLKGDKGPPGPVGANGSPGERGPLGPAGGIGLPGQSGSEGPVGPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDKGDAGPPGQPGIRGPAGHPGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPQGPTGSEGTPGLPGGVGQPGAVGEKGERGDAGDPGPPGAPGIPGPKGDIGEKGDSGPSGAAGPPGKKGPPGEDGAKGSVGPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGAPGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPGRTGPMGARGPPGRVGPEGLRGIPGPVGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSMGPRGDTGPAGPPGPPGAPAELHGLRRRRRFVPVPLPVVEGGLEEVLASLTSLSLELEQLRRPPGTAERPGLVCHELHRNHPHLPDGEYWIDPNQGCARDSFRVFCNFTAGGETCLYPDKKFEIVKLASWSKEKPGGWYSTFRRGKKFSYVDADGSPVNVVQLNFLKLLSATARQNFTYSCQNAAAWLDEATGDYSHSARFLGTNGEELSFNQTTAATVSVPQDGCRLRKGQTKTLFEFSSSRAGFLPLWDVAATDFGQTNQKFGFELGPVCFSS*