ENST00000648616.1 C18orf54
Information
- Transcript ID
- ENST00000648616.1
- Genome
- hg38
- Position
- chr18:54,358,482-54,378,845
- Strand
- +
- CDS length
- 1,062
- Amino acid length
- 354
- Gene symbol
- C18orf54
- Gene type
- protein-coding
- Gene description
- chromosome 18 open reading frame 54
- Gene Entrez Gene ID
- 162681
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 54,358,482 | 54,358,870 |
| 2 | 54,360,527 | 54,360,855 |
| 3 | 54,361,643 | 54,361,891 |
| 4 | 54,362,771 | 54,362,921 |
| 5 | 54,365,719 | 54,365,821 |
| 6 | 54,372,466 | 54,372,597 |
| 7 | 54,374,214 | 54,374,284 |
| 8 | 54,378,174 | 54,378,845 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 54,360,573 | 54,360,855 |
| 3 | CDS | 54,361,643 | 54,361,891 |
| 4 | CDS | 54,362,771 | 54,362,921 |
| 5 | CDS | 54,365,719 | 54,365,821 |
| 6 | CDS | 54,372,466 | 54,372,597 |
| 7 | CDS | 54,374,214 | 54,374,284 |
| 8 | CDS | 54,378,174 | 54,378,246 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr18 | 51,884,852 | 51,905,215 | Link |
CDS sequence
ATGGCGAAATCAAAGACAAAACATAGACTTTGTTCTCAGGAATCTTCAGTATCTGCCCTGCTGGCAAGCTGCACCCTGAGTGGTAGTAATTCCTCTAATTCTGATGGCTCGTTTCACTATAAAGATAAGCTGTACAGATCTGCTTCTCAAGCTCTACAGGCTTATATTGATGATTTTGATCTAGGCCAAATATATCCTGGTGCAAGCACTGGAAAAATTAACATTGATGAGGATTTTACTAATATGTCACAGTTCTGCAACTATATTTACAAACCAAACAATGCTTTTGAAAACCTTGATCACAAAAAGCACTCAAACTTCATATCCTGTAGAAGACACACCGTTAATGACATAGACTCCATGAGCCTAACAACTGATGATCTATTAAGACTCCCAGCAGATGGATCATTTTCTTATACTTATGTTGGACCGAGTCACCGAACGAGCAAGAAAAACAAGAAATGCCGTGGAAGACTGGGTTCATTGGACATTGAGAAGAATCCACATTTTCAAGGACCCTACACTTCCATGGGTGACAAAATTGAATTGCTTATCTTGAAGGCCAAGAGAAATCTAGAGCAGTGTACTGAAGAATTACCAAAGTCCATGAAAAAGGATGACAGTCCTTGCTCATTAGATAAACTTGAAGCAGACAGATCATGGGAAAATATTCCTGTTACTTTCAAATCTCCTGTTCCCGTTAACTCTGATGATAGTCCTCAACAAACTTCAAGGGCAAAGAGTGCTAAAGGGGTTCTTGAAGACTTTCTAAATAATGATAATCAGAGCTGTACTCTCTCTGGAGGCAAACATCATGGTCCTGTTGAAGCCCTGAAACAAATGTTATTTAACCTTCAAGCAGTACAAGAACGTTTTAATCAAAATAAGACCACAGATCCAAAAGAAGAGATTAAACAAGTTTCAGAAGATGATTTCTCTAAATTACAGTTGAAGGAAAGTATGATTCCTATTACTAGGTCACTTCAGAAGGCTTTGCACCATTTATCTCGCCTGAGAGACCTGGTTGATGATACGAATGGAGAACGGTCACCGAAAATGTGA
Amino sequence
MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKLYRSASQALQAYIDDFDLGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHKKHSNFISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLGSLDIEKNPHFQGPYTSMGDKIELLILKAKRNLEQCTEELPKSMKKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFLNNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKLQLKESMIPITRSLQKALHHLSRLRDLVDDTNGERSPKM*