ENST00000684498.1 GARIN1A
Information
- Transcript ID
- ENST00000684498.1
- Genome
- hg38
- Position
- chr7:128,672,281-128,683,434
- Strand
- +
- CDS length
- 915
- Amino acid length
- 305
- Gene symbol
- GARIN1A
- Gene type
- protein-coding
- Gene description
- golgi associated RAB2 interactor 1A
- Gene Entrez Gene ID
- 346653
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 128,672,281 | 128,672,550 |
| 2 | 128,675,663 | 128,675,859 |
| 3 | 128,677,564 | 128,677,813 |
| 4 | 128,680,031 | 128,680,149 |
| 5 | 128,682,964 | 128,683,434 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 128,672,398 | 128,672,550 |
| 2 | CDS | 128,675,663 | 128,675,859 |
| 3 | CDS | 128,677,564 | 128,677,813 |
| 4 | CDS | 128,680,031 | 128,680,149 |
| 5 | CDS | 128,682,964 | 128,683,159 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 128,312,335 | 128,323,488 | Link |
CDS sequence
ATGAGTAAAATCAGGGGCCTCCCACCTGAGGTCAGGGAACCAGGCCCTGGAGTGGAACTTGGGGTGGAAAATGGCCTTCTTTGTCAACTGATTCATTCTCCAGAATTCAATTTGTTCTCCAACTCGGTGGTGTTTGAAAGCAACTTTATCCAGGCTGATTTCCAGGTCACTAAGCCCGGGAACTGGAGAGATGTCTGTGAAGGGTCTGCCACCGTGATCCTCGGGGTCACCTCCTCGGTGCCCTCCCTGCCACTCCCCAATGTCCTCCTGATGGCCAATGTTACCTGGCCCCAGGGTCCATTTACCACCTGGAGCACACCTGGTGACGCCCCAGTCATCAACCTCAGCAGGCTTCTCCCCCTGAAGTACGTGGAGCTACGAATCTACGACCGGCTCCAGCGCATCCTGAGGGTTAGGACAGTGACCGAAAAGATCTACTATCTGAAGCTCCACGAAAAACACCCAGAGATTGTGTTTCAATTCTGGGTCCGCTTGGTGAAAATTCTGCAGAAAGGCCTGTCCATCACCACCAAAGACCCGAGAATCAAATTCACTCACTGCCTGGTGCCCAAGATGCCCACCAACTCCACAGAAACAACACCTGAAAACAGCCTCCTGTCATCCCCCCAGCCCAGCGAGCCCCTCGTGCTGCTGGCGGCTGAGCAGACCAGTGGCAGTTTCTCACAGCTCTCAGGAAAGCCCCAGCTCACAGCAGACAGGAACAATGACACTGCCATTGAAATAGACAACTGCAGCAGCTACAAGATACCCTCTCCAGTGGCATCTCCAATCAATTTGAATATACCCATGAGAGCTGCCTTGAGCCACAGCCTCTGGGAACAAGAGGACTGGAATGAGCACCTTCTACAAGTTCATATAGCCAGTTACCTAGGAGAGCACTTCTTGGGAGCCTGA
Amino sequence
MSKIRGLPPEVREPGPGVELGVENGLLCQLIHSPEFNLFSNSVVFESNFIQADFQVTKPGNWRDVCEGSATVILGVTSSVPSLPLPNVLLMANVTWPQGPFTTWSTPGDAPVINLSRLLPLKYVELRIYDRLQRILRVRTVTEKIYYLKLHEKHPEIVFQFWVRLVKILQKGLSITTKDPRIKFTHCLVPKMPTNSTETTPENSLLSSPQPSEPLVLLAAEQTSGSFSQLSGKPQLTADRNNDTAIEIDNCSSYKIPSPVASPINLNIPMRAALSHSLWEQEDWNEHLLQVHIASYLGEHFLGA*