ENST00000588062.5 TRAPPC6A

Information
Transcript ID
ENST00000588062.5
Genome
hg38
Position
chr19:45,162,928-45,178,237
Strand
-
CDS length
342
Amino acid length
114
Gene symbol
TRAPPC6A
Gene type
protein-coding
Gene description
trafficking protein particle complex subunit 6A
Gene Entrez Gene ID
79090
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 45,162,928 45,163,223
4 45,163,916 45,164,009
3 45,164,164 45,164,247
2 45,164,853 45,164,970
1 45,178,135 45,178,237
CDS
Exon number Type Start Stop
4 CDS 45,163,954 45,164,009
3 CDS 45,164,164 45,164,247
2 CDS 45,164,853 45,164,970
1 CDS 45,178,135 45,178,218
Other genome
Genome Chromosome Start End Links
hg19 chr19 45,666,186 45,681,495 Link
CDS sequence
ATGGCGGATACTGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGCTGAGCTGTGGGCTCACGACCCCGACCCCGGCCCGGGGGCTGCCCCGGGAGACGCTGGCCTTCAGGGAGGAGCTGGATGTCCTCAAGTTCTTGTGCAAAGACCTGTGGGTGGCGGTGTTCCAGAAGCAGATGGACAGCCTGCGCACCAATCACCAGGGGACCTACGTCCTGCAAGACAACAGCTTCCCCCTCCTCCTCCCGATGGCCTCTGGCCTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCACCTGCGGCCTCCTGCGCGGCGCCCTCTATACCCTGGGCATTGA
Amino sequence
MADTVLFEFLHTEMVAELWAHDPDPGPGAAPGDAGLQGGAGCPQVLVQRPVGGGVPEADGQPAHQSPGDLRPARQQLPPPPPDGLWPAVSGGSTQVPGLHLRPPARRPLYPGH*