ENST00000372542.5 SNX21

Information
Transcript ID
ENST00000372542.5
Genome
hg38
Position
chr20:45,833,895-45,841,730
Strand
+
CDS length
1,095
Amino acid length
365
Gene symbol
SNX21
Gene type
protein-coding
Gene description
sorting nexin family member 21
Gene Entrez Gene ID
90203
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,833,895 45,834,468
2 45,834,959 45,835,116
3 45,840,639 45,841,730
CDS
Exon number Type Start Stop
1 CDS 45,834,207 45,834,468
2 CDS 45,834,959 45,835,116
3 CDS 45,840,639 45,841,313
Other genome
Genome Chromosome Start End Links
hg19 chr20 44,462,534 44,470,369 Link
CDS sequence
ATGGCCTCCCGGCTCCTGCACCGGCTGCGGCACGCCTTGGCCGGCGACGGCCCCGGGGAGGCGGCGGCCAGTCCAGAGGCCGAGCAGTTTCCGGAGAGCTCAGAGCTGGAGGACGACGACGCCGAGGGCCTGTCCTCCCGACTCAGCGGCACCCTCAGCTTCACCAGCGCCGAGGACGACGAGGACGACGAGGACGAGGACGACGAGGAGGCTGGCCCTGACCAGCTGCCCCTCGGGGATGGGACGTCAGGAGAAGACGCAGAACGGAGCCCCCCACCTGATGGGCAGTGGGGCAGTCAGCTCCTGGCGCGGCAGCTGCAGGATTTCTGGAAGAAGTCCCGGAACACCTTGGCACCCCAGCGGCTGCTCTTCGAAGTGACCAGCGCTAACGTTGTCAAGGACCCGCCCTCCAAGTACGTGCTCTACACCCTCGCCGTGATCGGCCCAGGACCGCCAGATTGCCAGCCAGCCCAGATCTCTCGCCGTTACTCGGACTTTGAGCGGCTGCACCGAAACCTGCAGCGGCAATTCCGGGGCCCAATGGCTGCCATCTCCTTCCCCCGTAAGCGGCTGCGCCGGAATTTTACTGCAGAGACCATTGCCCGCCGTAGCCGGGCCTTTGAGCAGTTTTTGGGTCACCTGCAGGCAGTGCCTGAGCTGCGCCATGCCCCGGACCTGCAGGACTTCTTCGTGCTGCCGGAGCTGCGGCGGGCACAGAGCCTCACCTGTACTGGCCTCTATCGTGAGGCTCTGGCACTCTGGGCCAATGCCTGGCAGCTGCAAGCCCAGCTGGGCACCCCCTCTGGCCCAGACCGCCCCCTGCTGACCCTGGCTGGGCTGGCCGTGTGCCACCAGGAGCTGGAAGACCCTGGAGAGGCCCGGGCATGCTGTGAGAAGGCCCTGCAGCTGCTTGGGGACAAGAGCCTCCACCCTTTGCTGGCACCCTTTCTGGAGGCCCATGTCCGGCTCTCCTGGCGCCTGGGCCTGGACAAACGTCAATCAGAGGCTCGGCTCCAAGCCCTGCAGGAGGCAGGCCTTACCCCCACACCACCCCCCAGTCTCAAAGAATTGCTCATCAAGGAGGTGCTGGACTAA
Amino sequence
MASRLLHRLRHALAGDGPGEAAASPEAEQFPESSELEDDDAEGLSSRLSGTLSFTSAEDDEDDEDEDDEEAGPDQLPLGDGTSGEDAERSPPPDGQWGSQLLARQLQDFWKKSRNTLAPQRLLFEVTSANVVKDPPSKYVLYTLAVIGPGPPDCQPAQISRRYSDFERLHRNLQRQFRGPMAAISFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRRAQSLTCTGLYREALALWANAWQLQAQLGTPSGPDRPLLTLAGLAVCHQELEDPGEARACCEKALQLLGDKSLHPLLAPFLEAHVRLSWRLGLDKRQSEARLQALQEAGLTPTPPPSLKELLIKEVLD*