ENST00000251900.9 SCML2

Information
Transcript ID
ENST00000251900.9
Genome
hg38
Position
chrX:18,239,313-18,354,688
Strand
-
CDS length
2,103
Amino acid length
701
Gene symbol
SCML2
Gene type
protein-coding
Gene description
Scm polycomb group protein like 2
Gene Entrez Gene ID
10389
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 18,239,313 18,241,379
14 18,242,439 18,242,590
13 18,246,577 18,246,828
12 18,247,769 18,247,882
11 18,256,848 18,257,030
10 18,258,044 18,258,247
9 18,260,171 18,260,291
8 18,265,585 18,265,802
7 18,304,972 18,305,215
6 18,320,332 18,320,420
5 18,323,859 18,324,093
4 18,324,907 18,324,977
3 18,330,587 18,330,655
2 18,334,050 18,334,095
1 18,354,592 18,354,688
CDS
Exon number Type Start Stop
15 CDS 18,241,251 18,241,379
14 CDS 18,242,439 18,242,590
13 CDS 18,246,577 18,246,828
12 CDS 18,247,769 18,247,882
11 CDS 18,256,848 18,257,030
10 CDS 18,258,044 18,258,247
9 CDS 18,260,171 18,260,291
8 CDS 18,265,585 18,265,802
7 CDS 18,304,972 18,305,215
6 CDS 18,320,332 18,320,420
5 CDS 18,323,859 18,324,093
4 CDS 18,324,907 18,324,977
3 CDS 18,330,587 18,330,655
2 CDS 18,334,050 18,334,071
Other genome
Genome Chromosome Start End Links
hg19 chrX 18,257,433 18,372,808 Link
CDS sequence
ATGGGACAAACAGTGAATGAAGATTCCATGGATGTCAAGAAGGAGAATCAAGAGAAAACTCCTCAGTCAAGTACATCTTCTGTACAAAGGGATGATTTCCACTGGGAGGAGTATTTGAAAGAGACTGGGTCTATAAGTGCTCCTTCAGAGTGCTTCCGTCAGTCTCAGATTCCACCTGTGAATGATTTCAAAGTTGGTATGAAATTGGAAGCCCGTGACCCTCGCAATGCCACTTCAGTATGTATTGCTACGGTTATTGGAATTACTGGGGCCAGGTTACGGTTACGACTGGATGGTAGTGACAACAGAAATGATTTTTGGAGGCTTGTCGATTCCCCAGACATACAACCTGTTGGGACATGTGAAAAGGAAGGAGACTTACTTCAACCTCCACTAGGGTACCAGATGAATACATCCTCCTGGCCGATGTTCCTCTTAAAGACACTAAATGGGTCTGAAATGGCATCTGCCACATTATTTAAGAAGGAACCACCAAAGCCCCCACTAAATAATTTTAAAGTGGGGATGAAACTGGAAGCTATTGACAAAAAGAACCCGTATCTCATCTGTCCTGCGACCATTGGAGATGTTAAAGGGGATGAAGTTCATATCACATTTGATGGCTGGAGTGGAGCTTTTGATTACTGGTGCAAGTATGATTCTCGAGATATTTTCCCAGCTGGGTGGTGTCGCCTGACAGGAGATGTATTACAACCCCCAGGAACTAGTGTTCCTATTGTAAAGAATATAGCAAAAACAGAGTCTTCTCCTTCCGAAGCAAGCCAGCATTCAATGCAGTCTCCACAGAAAACTACTCTAATATTACCAACACAGCAGGTCAGGAGATCAAGTCGAATTAAACCACCTGGACCTACTGCAGTCCCCAAAAGGAGCAGTTCTGTTAAAAATATCACACCAAGGAAAAAAGGTCCAAACTCAGGAAAAAAGGAAAAACCTTTGCCCGTGATATGTTCTACATCTGCAGCTTCTCTAAAATCGCTGACCAGAGACCGTGGCATGTTATATAAAGATGTCGCTTCTGGGCCATGTAAAATAGTGATGTCTACAGTCTGTGTCTATGTAAACAAACATGGAAACTTTGGCCCTCATCTGGATCCCAAGAGAATCCAGCAGCTGCCTGACCACTTCGGCCCGGGCCCGGTGAATGTGGTGCTTCGCCGGATTGTGCAGGCCTGTGTGGATTGTGCCCTTGAAACTAAAACTGTTTTTGGATACCTGAAGCCAGATAATCGTGGAGGAGAAGTGATAACTGCCTCCTTTGATGGGGAAACTCATTCCATCCAGCTCCCTCCAGTGAACAGTGCATCATTTGCTCTTCGCTTTCTTGAGAACTTCTGCCACAGTCTGCAGTGTGATAACCTTTTGAGTAGCCAGCCTTTTAGTTCTTCCAGGGGTCATACTCACAGCTCTGCAGAGCATGATAAAAATCAGTCAGCAAAAGAAGATGTAACAGAAAGGCAAAGCACCAAACGATCTCCTCAGCAAACTGTACCATATGTTGTTCCTCTCTCTCCTAAGCTCCCCAAAACAAAGGAGTATGCGTCTGAAGGAGAACCATTGTTTGCTGGGGGAAGTGCCATTCCCAAAGAGGAGAATCTTTCAGAAGATTCTAAGAGCTCATCACTAAATTCAGGAAATTATTTGAATCCTGCCTGTAGAAATCCTATGTATATTCATACTTCAGTCTCCCAGGATTTTTCTCGAAGTGTGCCAGGCACCACAAGTTCACCACTAGTTGGGGACATATCCCCCAAGAGCAGTCCCCATGAAGTTAAATTCCAAATGCAGAGGAAAAGTGAAGCTCCAAGTTATATAGCTGTACCTGATCCCAGTGTCCTGAAACAAGGCTTCTCTAAGGACCCTTCAACCTGGTCTGTGGATGAAGTGATACAGTTTATGAAACATACAGATCCTCAGATATCAGGCCCCCTCGCCGACCTCTTCAGGCAACATGAAATTGATGGGAAGGCTCTGTTCCTACTCAAGAGTGATGTGATGATGAAGTATATGGGGCTGAAGCTGGGGCCAGCATTAAAGCTGTGTTACTACATTGAAAAGCTTAAAGAAGGAAAATACAGTTAA
Amino sequence
MGQTVNEDSMDVKKENQEKTPQSSTSSVQRDDFHWEEYLKETGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTSVPIVKNIAKTESSPSEASQHSMQSPQKTTLILPTQQVRRSSRIKPPGPTAVPKRSSSVKNITPRKKGPNSGKKEKPLPVICSTSAASLKSLTRDRGMLYKDVASGPCKIVMSTVCVYVNKHGNFGPHLDPKRIQQLPDHFGPGPVNVVLRRIVQACVDCALETKTVFGYLKPDNRGGEVITASFDGETHSIQLPPVNSASFALRFLENFCHSLQCDNLLSSQPFSSSRGHTHSSAEHDKNQSAKEDVTERQSTKRSPQQTVPYVVPLSPKLPKTKEYASEGEPLFAGGSAIPKEENLSEDSKSSSLNSGNYLNPACRNPMYIHTSVSQDFSRSVPGTTSSPLVGDISPKSSPHEVKFQMQRKSEAPSYIAVPDPSVLKQGFSKDPSTWSVDEVIQFMKHTDPQISGPLADLFRQHEIDGKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLKEGKYS*