ENST00000589614.5 TREM1

Information
Transcript ID
ENST00000589614.5
Genome
hg38
Position
chr6:41,267,926-41,286,665
Strand
-
CDS length
753
Amino acid length
251
Gene symbol
TREM1
Gene type
protein-coding
Gene description
triggering receptor expressed on myeloid cells 1
Gene Entrez Gene ID
54210
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 41,267,926 41,268,088
3 41,280,961 41,281,153
2 41,282,395 41,282,751
1 41,286,607 41,286,665
CDS
Exon number Type Start Stop
4 CDS 41,267,935 41,268,088
3 CDS 41,280,961 41,281,153
2 CDS 41,282,395 41,282,751
1 CDS 41,286,607 41,286,655
Other genome
Genome Chromosome Start End Links
hg19 chr6 41,235,664 41,254,403 Link
CDS sequence
ATGAGGAAGACCAGGCTCTGGGGGCTGCTGTGGATGCTCTTTGTCTCAGAACTCCGAGCTGCAACTAAATTAACTGAGGAAAAGTATGAACTGAAAGAGGGGCAGACCCTGGATGTGAAATGTGACTACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATACTAGAAGACTACCATGATCATGGTTTACTGCGCGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGACTGTATCAGTGTGTGATCTACCAGCCTCCCAAGGAGCCTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGACCCCTGGCTCCAATGAGAATTCTACCCAGAATGTGTATAAGATTCCTCCTACCACCACTAAGGCCTTGTGCCCACTCTATACCAGCCCCAGAACTGTGACCCAAGCTCCACCCAAGTCAACTGCCGATGTCTCCACTCCTGACTCTGAAATCAACCTTACAAATGTGACAGATATCATCAGGGAAAAGAGCATGACATTTGGCATCAGAAGGCTGGATGTGGAATCCCATCCTCTCCCACCACTGCACACTGGGCACTTTCGGATAAGTCAGTTCTTCTCCCAGGCTGGAACTCAATCCTTGCATTCATGTTATAAAGGAAAACCTACGCCCTGA
Amino sequence
MRKTRLWGLLWMLFVSELRAATKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQVEDSGLYQCVIYQPPKEPHMLFDRIRLVVTKGFSGTPGSNENSTQNVYKIPPTTTKALCPLYTSPRTVTQAPPKSTADVSTPDSEINLTNVTDIIREKSMTFGIRRLDVESHPLPPLHTGHFRISQFFSQAGTQSLHSCYKGKPTP*