ENST00000615471.4 SMIM22
Information
- Transcript ID
- ENST00000615471.4
- Genome
- hg38
- Position
- chr16:4,788,397-4,796,231
- Strand
- +
- CDS length
- 408
- Amino acid length
- 136
- Gene symbol
- SMIM22
- Gene type
- protein-coding
- Gene description
- small integral membrane protein 22
- Gene Entrez Gene ID
- 440335
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 4,788,397 | 4,788,771 |
| 2 | 4,794,952 | 4,795,076 |
| 3 | 4,795,715 | 4,795,858 |
| 4 | 4,795,948 | 4,796,231 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 3 | CDS | 4,795,735 | 4,795,858 |
| 4 | CDS | 4,795,948 | 4,796,231 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 4,838,398 | 4,846,232 | Link |
CDS sequence
ATGGCTGTGTCCACAGAGGAGCTGGAGGCCACGGTTCAGGAAGTCCTGGGGAGACTGAAGAGCCACCAGTTTTTCCAGTCCACATGGGACACTGTTGCCTTCATTGTTTTCCTCACCTTCATGGGCACCGTGCTGCTCCTGCTGCTGCTGGTCGTCGCCCACTGCTGCTGCTGCAGCTCCCCCGGGCCCCGCAGGGAAAGCCCCAGGAAGGTGAGCCCCTGGAAGGTGAGCCCTGCCGGCCTCTGGGACCTGCACGGAACTGTACTGGGGGTGGAGGCGGAAGGTGAGGGGAGTGGCGGGAAGGGTGCTCATCCCCCTAGGGAACAACGAGCGAACCTGCTTGGTCCCGCTGTGCTTCTCGTGCAGGAAAGACCCAAGGGAGTGGATAACTTGGCCCTGGAACCCTGA
Amino sequence
MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKVSPWKVSPAGLWDLHGTVLGVEAEGEGSGGKGAHPPREQRANLLGPAVLLVQERPKGVDNLALEP*