ENST00000276241.11 CT55
Information
- Transcript ID
- ENST00000276241.11
- Genome
- hg38
- Position
- chrX:135,156,540-135,171,398
- Strand
- -
- CDS length
- 795
- Amino acid length
- 265
- Gene symbol
- CT55
- Gene type
- protein-coding
- Gene description
- cancer/testis antigen 55
- Gene Entrez Gene ID
- 54967
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 135,156,540 | 135,157,028 |
| 5 | 135,157,316 | 135,157,503 |
| 4 | 135,158,199 | 135,158,311 |
| 3 | 135,160,411 | 135,160,555 |
| 2 | 135,169,594 | 135,169,778 |
| 1 | 135,171,078 | 135,171,398 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 135,156,959 | 135,157,028 |
| 5 | CDS | 135,157,316 | 135,157,503 |
| 4 | CDS | 135,158,199 | 135,158,311 |
| 3 | CDS | 135,160,411 | 135,160,555 |
| 2 | CDS | 135,169,594 | 135,169,778 |
| 1 | CDS | 135,171,078 | 135,171,171 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 134,290,465 | 134,305,322 | Link |
CDS sequence
ATGCTCAGGCTTCTGAGACTTGCTTTGGCCTTCTACGGGAGGACGGCCGACCCTGCAGAGCGACAGGGCCCACAGCAGCAGGGCCTCCCACAAGGTGACACCCAGTTGACAACTGTGCAGGGAGTTGTCACAAGTTTCTGTGGTGATTATGGCATGATTGATGAGTCGATCTACTTCAGTAGTGATGTTGTGACTGGCAACGTGCCTCTAAAAGTTGGACAAAAAGTTAATGTGGTTGTGGAAGAAGATAAACCACATTATGGATTGAGAGCAATCAAGGTGGATGTTGTGCCTCGCCATCTTTATGGTGCTGGACCCTCAGACTCAGGAACCAGAGTTTTAATTGGATGTGTTACTTCTATAAATGAAGATAATATTTATATTAGTAACAGCATTTATTTTTCCATAGCCATTGTTTCTGAAGATTTTGTGCCTTATAAGGGTGACTTGTTAGAAGTTGAATATTCCACTGAGCCAGGCATCTCAAACATCAAGGCAACTTCTGTGAAGCCCATCCGTTGTATTCATACGGAAGAGGTCTGCATTACTAGCGTACATGGAAGAAATGGGGTGATAGATTATACTATTTTTTTCACCTTGGATTCTGTGAAACTTCCTGATGGATACGTACCTCAAGTAGATGATATCGTCAATGTGGTCATGGTGGAGAGCATTCAGTTCTGCTTTATTTGGAGAGCGATTTCTATCACCCCAGTGCATAAATCCAGCAGCGGATTCCAGGATGACGGAGGCCTGGGACGGCCCAAAAGGGAACGTCGGAGCCAAAGCATTTAA
Amino sequence
MLRLLRLALAFYGRTADPAERQGPQQQGLPQGDTQLTTVQGVVTSFCGDYGMIDESIYFSSDVVTGNVPLKVGQKVNVVVEEDKPHYGLRAIKVDVVPRHLYGAGPSDSGTRVLIGCVTSINEDNIYISNSIYFSIAIVSEDFVPYKGDLLEVEYSTEPGISNIKATSVKPIRCIHTEEVCITSVHGRNGVIDYTIFFTLDSVKLPDGYVPQVDDIVNVVMVESIQFCFIWRAISITPVHKSSSGFQDDGGLGRPKRERRSQSI*