ENST00000527616.1 HSPB2-C11orf52

Information
Transcript ID
ENST00000527616.1
Genome
hg38
Position
chr11:111,912,736-111,918,850
Strand
+
CDS length
549
Amino acid length
183
Gene symbol
HSPB2-C11orf52
Gene type
ncRNA
Gene description
HSPB2-C11orf52 readthrough (NMD candidate)
Gene Entrez Gene ID
100528019
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 111,912,736 111,912,923
2 111,913,441 111,913,971
3 111,918,678 111,918,850
CDS
Exon number Type Start Stop
1 CDS 111,912,830 111,912,923
2 CDS 111,913,441 111,913,895
Other genome
Genome Chromosome Start End Links
hg19 chr11 111,783,460 111,789,574 Link
CDS sequence
ATGTCGGGCCGCTCAGTGCCACATGCCCACCCGGCCACCGCCGAGTACGAATTTGCCAACCCGAGCCGCCTGGGTGAGCAGCGCTTCGGAGAAGGCCTCCTGCCAGAAGAGATCCTGACCCCCACACTCTACCATGGCTACTATGTCCGGCCTCGGGCCGCCCCAGCTGGGGAGGGCAGCAGGGCAGGGGCCTCCGAGCTTAGGCTCAGTGAGGGCAAGTTCCAGGCATTTCTGGATGTGAGCCACTTTACCCCAGACGAGGTGACTGTGAGGACTGTGGATAACCTGCTGGAGGTGTCTGCCCGGCACCCCCAGCGCCTGGACCGCCACGGCTTCGTGTCCCGAGAGTTCTGCCGCACCTATGTCCTGCCTGCTGATGTCGACCCCTGGCGAGTCCGAGCTGCTCTCTCCCATGATGGCATCTTAAACCTGGAAGCACCTCGGGGTGGCCGACATTTGGACACAGAGGTCAATGAGGTCTACATCTCCCTGCTCCCTGCGCCTCCTGATCCAGAGGAAGAGGAGGAGGCAGCCATAGTTGAGCCCTGA
Amino sequence
MSGRSVPHAHPATAEYEFANPSRLGEQRFGEGLLPEEILTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISLLPAPPDPEEEEEAAIVEP*