ENST00000649830.1 CHRNE
Information
- Transcript ID
- ENST00000649830.1
- Genome
- hg38
- Position
- chr17:4,898,085-4,934,438
- Strand
- -
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- CHRNE
- Gene type
- protein-coding
- Gene description
- cholinergic receptor nicotinic epsilon subunit
- Gene Entrez Gene ID
- 1145
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 11 | 4,898,085 | 4,899,107 |
| 10 | 4,899,198 | 4,899,384 |
| 9 | 4,899,468 | 4,899,582 |
| 8 | 4,900,793 | 4,900,907 |
| 7 | 4,900,990 | 4,901,190 |
| 6 | 4,901,525 | 4,901,625 |
| 5 | 4,901,932 | 4,902,087 |
| 4 | 4,902,217 | 4,902,326 |
| 3 | 4,902,450 | 4,902,494 |
| 2 | 4,902,621 | 4,902,763 |
| 1 | 4,934,342 | 4,934,438 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 11 | CDS | 4,898,854 | 4,899,107 |
| 10 | CDS | 4,899,198 | 4,899,384 |
| 9 | CDS | 4,899,468 | 4,899,566 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 4,801,380 | 4,837,733 | Link |
CDS sequence
ATGGTGGTCGCCACGCTCATTGTCATGAATTGCGTCATCGTGCTCAACGTGTCCCAGCGGACGCCCACCACCCACGCCATGTCCCCGCGGCTGCGCCACGTTCTCCTGGAGCTGCTGCCGCGCCTCCTGGGCTCCCCGCCGCCGCCCGAGGCCCCCCGGGCCGCCTCGCCCCCAAGGCGGGCGTCGTCGGTGGGCTTATTGCTCCGCGCGGAGGAGCTGATACTGAAAAAGCCACGGAGCGAGCTCGTGTTTGAGGGGCAGAGGCACCGGCAGGGGACCTGGACGGCTGCCTTCTGCCAGAGCCTGGGCGCCGCCGCCCCCGAGGTCCGCTGCTGTGTGGATGCCGTGAACTTCGTGGCCGAGAGCACGAGAGATCAGGAGGCCACCGGCGAGGTGGGACAGGAGCCAGAGGCGGGTGGAGCGAGGCAGAGGCCCACCACTGTCTCCCATGCCGCTGGCTCCTGCAGCTGCCTCTTTACTGACTGTGCCGACCCTTCCCCAGGAAGTGTCCGACTGGGTGCGCATGGGGAATGCCCTTGA
Amino sequence
MVVATLIVMNCVIVLNVSQRTPTTHAMSPRLRHVLLELLPRLLGSPPPPEAPRAASPPRRASSVGLLLRAEELILKKPRSELVFEGQRHRQGTWTAAFCQSLGAAAPEVRCCVDAVNFVAESTRDQEATGEVGQEPEAGGARQRPTTVSHAAGSCSCLFTDCADPSPGSVRLGAHGECP*