ENST00000590327.6 TSPAN16

Information
Transcript ID
ENST00000590327.6
Genome
hg38
Position
chr19:11,296,160-11,315,967
Strand
+
CDS length
735
Amino acid length
245
Gene symbol
TSPAN16
Gene type
protein-coding
Gene description
tetraspanin 16
Gene Entrez Gene ID
26526
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 11,296,160 11,296,366
2 11,298,142 11,298,339
3 11,298,872 11,298,946
4 11,301,201 11,301,308
5 11,306,604 11,306,756
6 11,312,139 11,312,222
7 11,315,791 11,315,967
CDS
Exon number Type Start Stop
1 CDS 11,296,298 11,296,366
2 CDS 11,298,142 11,298,339
3 CDS 11,298,872 11,298,946
4 CDS 11,301,201 11,301,308
5 CDS 11,306,604 11,306,756
6 CDS 11,312,139 11,312,222
7 CDS 11,315,791 11,315,838
Other genome
Genome Chromosome Start End Links
hg19 chr19 11,406,836 11,426,643 Link
CDS sequence
ATGGCTGAAATCCACACTCCGTATTCTTCCTTGAAGAAACTGTTATCTTTACTCAATGGCTTCGTGGCTGTGTCTGGCATCATCCTAGTTGGCCTGGGCATTGGTGGTAAATGTGGAGGGGCCTCTCTGACGAATGTCCTCGGGCTGTCCTCCGCATACCTCCTTCACGTTGGCAACCTGTGCCTGGTGATGGGATGCATCACGGTACTGCTTGGCTGTGCCGGGTGGTATGGAGCGACTAAAGAGAGCAGAGGCACGCTCTTGTTTTGCATCCTGTCAATGGTTATTGTCCTCATCATGGAAGTTACAGCTGCCACAGTGGTCCTTCTTTTCTTTCCAATTGTTGGAGATGTGGCCTTGGAACACACCTTCGTGACCCTGAGGAAGAATTACAGAGGTTACAACGAGCCAGACGACTATTCTACACAGTGGAACTTGGTCATGGAGAAGCTAAAGTGCTGTGGGGTGAATAACTACACAGATTTTTCTGGCTCTTCCTTCGAAATGACAACGGGCCACACCTACCCCAGGAGTTGCTGTAAATCCATCGGAAGTGTGTCCTGTGACGGACGCGATGTGTCTCCAAACGTCATCCACCAGAAGGGCTGTTTCCATAAACTCCTAAAAATCACCAAGACTCAGAGCTTCACCCTGAGTGGGAGCTCTCTGGGAGCTGCAGTGATACAGTTGCCAGGAATTCTTGCCACTTTGCTGCTGTTTATCAAGCTGGGCTGA
Amino sequence
MAEIHTPYSSLKKLLSLLNGFVAVSGIILVGLGIGGKCGGASLTNVLGLSSAYLLHVGNLCLVMGCITVLLGCAGWYGATKESRGTLLFCILSMVIVLIMEVTAATVVLLFFPIVGDVALEHTFVTLRKNYRGYNEPDDYSTQWNLVMEKLKCCGVNNYTDFSGSSFEMTTGHTYPRSCCKSIGSVSCDGRDVSPNVIHQKGCFHKLLKITKTQSFTLSGSSLGAAVIQLPGILATLLLFIKLG*