ENST00000269499.10 ZCCHC2
Information
- Transcript ID
- ENST00000269499.10
- Genome
- hg38
- Position
- chr18:62,523,025-62,578,579
- Strand
- +
- CDS length
- 3,537
- Amino acid length
- 1,179
- Gene symbol
- ZCCHC2
- Gene type
- protein-coding
- Gene description
- zinc finger CCHC-type containing 2
- Gene Entrez Gene ID
- 54877
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 62,523,025 | 62,524,363 |
| 2 | 62,539,681 | 62,539,792 |
| 3 | 62,542,498 | 62,542,574 |
| 4 | 62,544,802 | 62,544,873 |
| 5 | 62,550,348 | 62,550,460 |
| 6 | 62,556,203 | 62,556,297 |
| 7 | 62,558,687 | 62,558,770 |
| 8 | 62,560,587 | 62,560,644 |
| 9 | 62,563,009 | 62,563,144 |
| 10 | 62,564,571 | 62,564,635 |
| 11 | 62,565,002 | 62,565,096 |
| 12 | 62,570,103 | 62,570,231 |
| 13 | 62,574,057 | 62,575,550 |
| 14 | 62,576,512 | 62,578,579 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 62,523,425 | 62,524,363 |
| 2 | CDS | 62,539,681 | 62,539,792 |
| 3 | CDS | 62,542,498 | 62,542,574 |
| 4 | CDS | 62,544,802 | 62,544,873 |
| 5 | CDS | 62,550,348 | 62,550,460 |
| 6 | CDS | 62,556,203 | 62,556,297 |
| 7 | CDS | 62,558,687 | 62,558,770 |
| 8 | CDS | 62,560,587 | 62,560,644 |
| 9 | CDS | 62,563,009 | 62,563,144 |
| 10 | CDS | 62,564,571 | 62,564,635 |
| 11 | CDS | 62,565,002 | 62,565,096 |
| 12 | CDS | 62,570,103 | 62,570,231 |
| 13 | CDS | 62,574,057 | 62,575,550 |
| 14 | CDS | 62,576,512 | 62,576,579 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr18 | 60,190,258 | 60,245,812 | Link |
CDS sequence
ATGCTGAGGATGAAGCTGCCGCTGAAGCCAACGCACCCCGCGGAGCCGCCGCCCGAGGCGGAGGAGCCCGAGGCGGACGCGCGGCCGGGCGCGAAGGCGCCTTCGCGCCGCCGCCGCGACTGCCGCCCCCCGCCGCCGCCGCCGCCGCCCGCGGGCCCGTCGCGGGGCCCTCTGCCGCCGCCGCCGCCGCCCCGGGGACTCGGGCCGCCTGTTGCTGGTGGAGCGGCGGCGGGGGCGGGTATGCCGGGCGGCGGCGGGGGGCCCTCGGCGGCGCTGCGCGAGCAGGAGCGGGTATACGAGTGGTTCGGGCTGGTGCTGGGCTCGGCGCAGCGCCTGGAGTTCATGTGCGGGCTGCTGGACCTGTGCAACCCGCTGGAGCTGCGCTTCCTTGGCTCGTGCCTGGAGGACCTGGCGCGCAAGGACTACCACTACCTGCGCGACTCGGAGGCCAAGGCCAACGGCCTCTCGGACCCGGGGCCGCTGGCCGACTTCCGAGAGCCCGCGGTGCGCTCGCGCCTCATCGTCTACCTGGCGCTGCTGGGCTCGGAGAACCGGGAGGCCGCTGGCCGTCTGCACCGCCTGCTACCCCAGGTGGACTCGGTGCTCAAAAGCCTGCGCGCGGCCCGGGGCGAGGGCTCGCGGGGCGGCGCGGAGGACGAGCGCGGCGAGGACGGCGACGGCGAGCAGGACGCCGAGAAGGACGGCTCAGGCCCGGAAGGCGGCATTGTGGAGCCCCGGGTCGGCGGCGGGCTTGGCTCCAGGGCCCAGGAGGAACTGCTGCTGCTCTTCACCATGGCCTCGCTGCACCCGGCTTTCTCCTTCCACCAGCGGGTCACCCTGAGGGAACACTTGGAGAGGCTCCGCGCCGCGCTCCGCGGGGGCCCCGAGGACGCGGAGGTGGAGGTAGAGCCGTGCAAGTTTGCCGGCCCCAGGGCCCAGAACAACTCTGCTCATGGTGATTACATGCAAAATAACGAGAGCAGCTTAATAGAGCAAGCTCCAATACCTCAGGACGGACTTACCGTGGCACCTCACAGAGCTCAGCGAGAAGCTGTACACATTGAGAAGATAATGTTGAAAGGAGTCCAGAGAAAAAGAGCTGACAAATACTGGGAGTACACTTTCAAAGTAAATTGGTCTGATCTTTCAGTCACAACAGTAACAAAAACCCACCAAGAACTACAGGAATTTCTACTGAAGCTTCCAAAGGAACTGTCTTCAGAGACTTTTGACAAGACCATCTTAAGAGCCCTGAATCAGGGTTCCTTGAAAAGGGAGGAACGGCGACATCCTGACCTAGAGCCCATCCTAAGGCAGCTATTTTCAAGTTCATCACAAGCTTTTCTACAAAGTCAGAAAGTACACAGCTTCTTTCAGTCCATATCATCAGACTCCCTACACAGTATCAATAACTTACAATCCTCTCTGAAGACTTCTAAGATATTAGAACACTTAAAAGAAGACAGCTCTGAAGCTTCAAGTCAAGAAGAAGATGTGTTGCAGCATGCCATAATCCACAAGAAGCATACTGGGAAAAGTCCCATTGTGAACAATATTGGTACAAGTTGTTCTCCATTGGATGGGCTTACCATGCAATATTCTGAACAGAATGGAATTGTGGATTGGAGGAAGCAAAGCTGTACCACCATTCAACACCCAGAGCACTGTGTGACCTCGGCTGACCAGCATTCTGCTGAAAAACGGAGTTTATCTTCAATAAATAAGAAGAAAGGAAAGCCACAAACAGAAAAGGAGAAAATTAAGAAAACTGACAACAGATTGAATAGTAGAATAAATGGTATTAGACTCTCCACTCCTCAGCATGCCCATGGTGGTACTGTGAAAGATGTGAATTTGGACATTGGCTCTGGACATGACACATGTGGAGAAACATCTTCAGAGAGTTACAGTTCTCCATCTAGTCCCCGACATGATGGAAGAGAAAGTTTTGAAAGTGAAGAAGAGAAAGACAGAGACACAGACAGCAATTCTGAGGATTCTGGGAATCCATCAACAACTAGGTTTACAGGTTACGGTTCTGTCAACCAGACTGTCACTGTCAAGCCACCTGTTCAAATTGCTTCACTAGGAAATGAGAATGGAAACCTTTTAGAAGATCCCTTAAACTCACCCAAGTATCAGCATATTTCTTTTATGCCAACGTTACACTGTGTCATGCACAATGGTGCCCAGAAGTCTGAAGTTGTCGTTCCTGCACCCAAACCCGCTGATGGCAAAACCATAGGGATGCTTGTTCCTAGTCCTGTTGCTATTTCTGCAATAAGGGAGTCTGCAAATTCAACCCCTGTTGGAATACTAGGGCCAACAGCTTGCACTGGAGAATCGGAAAAGCACCTTGAGTTACTGGCTTCCCCTTTACCTATTCCATCAACCTTCCTTCCACACAGTAGTACTCCCGCTTTGCATCTTACAGTTCAGAGGCTAAAGTTGCCACCACCACAGGGATCTTCTGAGAGCTGCACAGTTAACATCCCACAACAACCACCCGGAAGCCTGAGCATCGCATCACCAAACACTGCCTTTATTCCTATCCATAACCCAGGTAGTTTCCCAGGCTCTCCTGTTGCTACCACGGACCCCATCACAAAATCTGCATCCCAAGTGGTAGGACTCAATCAAATGGTGCCTCAAATTGAGGGAAACACAGGGACAGTCCCTCAGCCTACCAATGTGAAGGTAGTTCTTCCAGCAGCTGGCCTCTCAGCTGCTCAGCCACCAGCTTCCTACCCCTTACCAGGCTCTCCCCTTGCTGCCGGCGTGTTACCCAGCCAGAACTCCAGTGTGCTCAGCACAGCAGCAACTTCTCCCCAGCCAGCGAGCGCAGGTATCAGCCAGGCCCAGGCAACTGTTCCTCCTGCAGTTCCTACCCACACCCCAGGCCCTGCCCCGAGCCCAAGCCCTGCCTTGACACACAGTACCGCGCAGAGTGACAGCACCTCTTACATCAGTGCTGTGGGGAACACGAACGCTAATGGGACAGTAGTGCCACCGCAGCAGATGGGCTCAGGTCCTTGTGGTTCTTGTGGGCGAAGGTGCAGCTGTGGGACCAATGGAAACCTTCAGCTAAATAGTTACTATTATCCTAATCCAATGCCTGGACCAATGTACCGAGTCCCTTCATTCTTTACTCTGCCATCCATTTGCAATGGCAGCTACCTCAACCAAGCACATCAGAGCAATGGAAACCAACTTCCTTTTTTTCTGCCTCAGACTCCATATGCAAATGGACTGGTACATGACCCAGTCATGGGGAGCCAAGCCAACTATGGCATGCAGCAGATGGCAGGATTTGGGAGATTCTATCCTGTATATCCAGCACCTAACGTAGTTGCCAACACCAGTGGTTCGGGGCCCAAGAAGAATGGGAATGTCTCATGTTACAATTGTGGTGTAAGCGGACACTATGCACAGGACTGTAAGCAGTCGTCCATGGAGGCCAATCAACAAGGCACTTACAGACTGAGATACGCACCTCCCCTCCCCCCTTCTAATGATACGTTGGATTCTGCAGACTGA
Amino sequence
MLRMKLPLKPTHPAEPPPEAEEPEADARPGAKAPSRRRRDCRPPPPPPPPAGPSRGPLPPPPPPRGLGPPVAGGAAAGAGMPGGGGGPSAALREQERVYEWFGLVLGSAQRLEFMCGLLDLCNPLELRFLGSCLEDLARKDYHYLRDSEAKANGLSDPGPLADFREPAVRSRLIVYLALLGSENREAAGRLHRLLPQVDSVLKSLRAARGEGSRGGAEDERGEDGDGEQDAEKDGSGPEGGIVEPRVGGGLGSRAQEELLLLFTMASLHPAFSFHQRVTLREHLERLRAALRGGPEDAEVEVEPCKFAGPRAQNNSAHGDYMQNNESSLIEQAPIPQDGLTVAPHRAQREAVHIEKIMLKGVQRKRADKYWEYTFKVNWSDLSVTTVTKTHQELQEFLLKLPKELSSETFDKTILRALNQGSLKREERRHPDLEPILRQLFSSSSQAFLQSQKVHSFFQSISSDSLHSINNLQSSLKTSKILEHLKEDSSEASSQEEDVLQHAIIHKKHTGKSPIVNNIGTSCSPLDGLTMQYSEQNGIVDWRKQSCTTIQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEKEKIKKTDNRLNSRINGIRLSTPQHAHGGTVKDVNLDIGSGHDTCGETSSESYSSPSSPRHDGRESFESEEEKDRDTDSNSEDSGNPSTTRFTGYGSVNQTVTVKPPVQIASLGNENGNLLEDPLNSPKYQHISFMPTLHCVMHNGAQKSEVVVPAPKPADGKTIGMLVPSPVAISAIRESANSTPVGILGPTACTGESEKHLELLASPLPIPSTFLPHSSTPALHLTVQRLKLPPPQGSSESCTVNIPQQPPGSLSIASPNTAFIPIHNPGSFPGSPVATTDPITKSASQVVGLNQMVPQIEGNTGTVPQPTNVKVVLPAAGLSAAQPPASYPLPGSPLAAGVLPSQNSSVLSTAATSPQPASAGISQAQATVPPAVPTHTPGPAPSPSPALTHSTAQSDSTSYISAVGNTNANGTVVPPQQMGSGPCGSCGRRCSCGTNGNLQLNSYYYPNPMPGPMYRVPSFFTLPSICNGSYLNQAHQSNGNQLPFFLPQTPYANGLVHDPVMGSQANYGMQQMAGFGRFYPVYPAPNVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLRYAPPLPPSNDTLDSAD*