ENST00000621731.4 TSPAN16
Information
- Transcript ID
- ENST00000621731.4
- Genome
- hg38
- Position
- chr19:11,296,139-11,306,603
- Strand
- +
- CDS length
- 483
- Amino acid length
- 161
- Gene symbol
- TSPAN16
- Gene type
- protein-coding
- Gene description
- tetraspanin 16
- Gene Entrez Gene ID
- 26526
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 11,296,139 | 11,296,366 |
| 2 | 11,298,142 | 11,298,339 |
| 3 | 11,298,872 | 11,298,946 |
| 4 | 11,301,201 | 11,301,308 |
| 5 | 11,306,571 | 11,306,603 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 11,296,298 | 11,296,366 |
| 2 | CDS | 11,298,142 | 11,298,339 |
| 3 | CDS | 11,298,872 | 11,298,946 |
| 4 | CDS | 11,301,201 | 11,301,308 |
| 5 | CDS | 11,306,571 | 11,306,603 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 11,406,815 | 11,417,279 | Link |
CDS sequence
ATGGCTGAAATCCACACTCCGTATTCTTCCTTGAAGAAACTGTTATCTTTACTCAATGGCTTCGTGGCTGTGTCTGGCATCATCCTAGTTGGCCTGGGCATTGGTGGTAAATGTGGAGGGGCCTCTCTGACGAATGTCCTCGGGCTGTCCTCCGCATACCTCCTTCACGTTGGCAACCTGTGCCTGGTGATGGGATGCATCACGGTACTGCTTGGCTGTGCCGGGTGGTATGGAGCGACTAAAGAGAGCAGAGGCACGCTCTTGTTTTGCATCCTGTCAATGGTTATTGTCCTCATCATGGAAGTTACAGCTGCCACAGTGGTCCTTCTTTTCTTTCCAATTGTTGGAGATGTGGCCTTGGAACACACCTTCGTGACCCTGAGGAAGAATTACAGAGGTTACAACGAGCCAGACGACTATTCTACACAGTGGAACTTGGTCATGGAGAAGGGACTCTCCAAGTATTTCTTCTCCTCTCTATAG
Amino sequence
MAEIHTPYSSLKKLLSLLNGFVAVSGIILVGLGIGGKCGGASLTNVLGLSSAYLLHVGNLCLVMGCITVLLGCAGWYGATKESRGTLLFCILSMVIVLIMEVTAATVVLLFFPIVGDVALEHTFVTLRKNYRGYNEPDDYSTQWNLVMEKGLSKYFFSSL*