ENST00000225842.4 CCL1

Information
Transcript ID
ENST00000225842.4
Genome
hg38
Position
chr17:34,360,328-34,363,233
Strand
-
CDS length
291
Amino acid length
97
Gene symbol
CCL1
Gene type
protein-coding
Gene description
C-C motif chemokine ligand 1
Gene Entrez Gene ID
6346
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 34,360,328 34,360,661
2 34,361,785 34,361,896
1 34,363,086 34,363,233
CDS
Exon number Type Start Stop
3 CDS 34,360,559 34,360,661
2 CDS 34,361,785 34,361,896
1 CDS 34,363,086 34,363,161
Other genome
Genome Chromosome Start End Links
hg19 chr17 32,687,347 32,690,252 Link
CDS sequence
ATGCAGATCATCACCACAGCCCTGGTGTGCTTGCTGCTAGCTGGGATGTGGCCGGAAGATGTGGACAGCAAGAGCATGCAGGTACCCTTCTCCAGATGTTGCTTCTCATTTGCGGAGCAAGAGATTCCCCTGAGGGCAATCCTGTGTTACAGAAATACCAGCTCCATCTGCTCCAATGAGGGCTTAATATTCAAGCTGAAGAGAGGCAAAGAGGCCTGCGCCTTGGACACAGTTGGATGGGTTCAGAGGCACAGAAAAATGCTGAGGCACTGCCCGTCAAAAAGAAAATGA
Amino sequence
MQIITTALVCLLLAGMWPEDVDSKSMQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLRHCPSKRK*