ENST00000537590.5 SLC39A1

Information
Transcript ID
ENST00000537590.5
Genome
hg38
Position
chr1:153,959,099-153,963,641
Strand
-
CDS length
351
Amino acid length
117
Gene symbol
SLC39A1
Gene type
protein-coding
Gene description
solute carrier family 39 member 1
Gene Entrez Gene ID
27173
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 153,959,099 153,960,754
2 153,962,529 153,962,747
1 153,963,495 153,963,641
CDS
Exon number Type Start Stop
3 CDS 153,960,591 153,960,754
2 CDS 153,962,529 153,962,715
Other genome
Genome Chromosome Start End Links
hg19 chr1 153,931,575 153,936,117 Link
CDS sequence
ATGGGGCCCTGGGGAGAGCCAGAGCTCCTGGTGTGGCGCCCCGAGGCGGTAGCTTCAGAGCCTCCAGTGCCTGTGGGGCTGGAGGTGAAGTTGGGGGCCCTGGTGCTGCTGCTGGTGCTCACCCTCCTCTGCAGCCTGGTGCCCATCTGTGTGCTGCGCCGGCCAGGAGCTAACCATGAAGGCTCAGCTCCAGTTCCCACTGCAAGAGTTCATCCTGGCCATGGGCTTCTTCCTGGTCCTGGTGATGGAGCAGATCACACTGGCTTACAAGGAGCAGTCAGGGCCGTCACCTCTGGAGGAAACAAGGGCTCTGCTGGGAACAGTGAATGGTGGGCCGCAGCATTGGCATGA
Amino sequence
MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSAPVPTARVHPGHGLLPGPGDGADHTGLQGAVRAVTSGGNKGSAGNSEWWAAALA*