ENST00000683374.1 JOSD1
Information
- Transcript ID
- ENST00000683374.1
- Genome
- hg38
- Position
- chr22:38,685,543-38,700,943
- Strand
- -
- CDS length
- 609
- Amino acid length
- 203
- Gene symbol
- JOSD1
- Gene type
- protein-coding
- Gene description
- Josephin domain containing 1
- Gene Entrez Gene ID
- 9929
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 38,685,543 | 38,688,001 |
| 4 | 38,688,935 | 38,689,129 |
| 3 | 38,689,296 | 38,689,424 |
| 2 | 38,699,803 | 38,700,618 |
| 1 | 38,700,800 | 38,700,943 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 38,687,902 | 38,688,001 |
| 4 | CDS | 38,688,935 | 38,689,129 |
| 3 | CDS | 38,689,296 | 38,689,424 |
| 2 | CDS | 38,699,803 | 38,699,987 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr22 | 39,081,548 | 39,096,948 | Link |
CDS sequence
ATGAGTTGTGTGCCATGGAAAGGAGACAAGGCCAAATCTGAATCATTGGAGCTGCCCCAGGCAGCACCCCCACAAATCTACCATGAGAAACAGCGCAGGGAGCTTTGTGCCCTCCACGCCCTCAATAACGTCTTCCAGGACAGCAATGCCTTCACCCGGGATACGCTGCAAGAGATTTTCCAGAGGTTGTCTCCAAACACCATGGTGACACCTCACAAGAAGAGCATGCTGGGAAATGGCAACTACGATGTGAATGTCATTATGGCAGCACTTCAGACCAAAGGCTATGAAGCTGTTTGGTGGGACAAGCGCAGGGATGTCGGTGTCATTGCCCTCACTAACGTCATGGGCTTCATCATGAATCTGCCCTCCAGCCTATGCTGGGGTCCACTGAAACTGCCCCTCAAAAGGCAGCACTGGATCTGTGTTCGAGAGGTGGGAGGGGCCTACTACAACCTCGACTCCAAACTCAAGATGCCCGAGTGGATTGGAGGCGAGAGCGAGCTCAGGAAGTTTCTAAAACATCATTTGCGAGGAAAGAACTGTGAACTCCTGCTGGTGGTACCAGAAGAGGTAGAGGCTCATCAGAGTTGGAGGACCGATGTGTAA
Amino sequence
MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLVVPEEVEAHQSWRTDV*