ENST00000598409.6 SMIM17

Information
Transcript ID
ENST00000598409.6
Genome
hg38
Position
chr19:56,643,159-56,657,247
Strand
+
CDS length
357
Amino acid length
119
Gene symbol
SMIM17
Gene type
protein-coding
Gene description
small integral membrane protein 17
Gene Entrez Gene ID
147670
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 56,643,159 56,643,210
2 56,645,568 56,645,836
3 56,647,558 56,647,634
4 56,655,103 56,657,247
CDS
Exon number Type Start Stop
2 CDS 56,645,668 56,645,836
3 CDS 56,647,558 56,647,634
4 CDS 56,655,103 56,655,213
Other genome
Genome Chromosome Start End Links
hg19 chr19 57,154,527 57,168,615 Link
CDS sequence
ATGCAGAGTCTCAGGCCTGAGCAGACACGGGGGCTGCTGGAGCCTGAGAGGACCAAGACTCTGCTGCCTCGGGAGAGCCGGGCCTGGGAGAAGCCTCCTCATCCCGCCTGCACCAAAGACTGGGAGGCTGTGGAGGTTGGGGCCTCCAGCCATGACAGTGATGAGAAAGACCTGTCTTCTCAAGAGACTGGGCTTTCCCAGGAGTGGAGCTCGGTGGAGGAAGATGACGAATCAGAGGGCTCCCAGGGCTTTGTGGAGTGGTCAAAAGCTCCACAACAAACAACCATAGTCTTGGTAGTGTGCGTGCTTTTTTTGTTCCTGGTTTTAACGGGGATGCCTATGATGTTTCACATTTAA
Amino sequence
MQSLRPEQTRGLLEPERTKTLLPRESRAWEKPPHPACTKDWEAVEVGASSHDSDEKDLSSQETGLSQEWSSVEEDDESEGSQGFVEWSKAPQQTTIVLVVCVLFLFLVLTGMPMMFHI*