ENST00000308127.9 SSH3

Information
Transcript ID
ENST00000308127.9
Genome
hg38
Position
chr11:67,303,530-67,312,592
Strand
+
CDS length
1,980
Amino acid length
660
Gene symbol
SSH3
Gene type
protein-coding
Gene description
slingshot protein phosphatase 3
Gene Entrez Gene ID
54961
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 67,303,530 67,303,691
2 67,304,118 67,304,155
3 67,304,773 67,305,007
4 67,306,838 67,306,962
5 67,307,042 67,307,113
6 67,307,371 67,307,436
7 67,307,549 67,307,737
8 67,307,846 67,307,939
9 67,308,174 67,308,302
10 67,308,412 67,308,458
11 67,309,397 67,309,543
12 67,309,768 67,309,968
13 67,310,066 67,310,339
14 67,311,591 67,312,592
CDS
Exon number Type Start Stop
1 CDS 67,303,626 67,303,691
2 CDS 67,304,118 67,304,155
3 CDS 67,304,773 67,305,007
4 CDS 67,306,838 67,306,962
5 CDS 67,307,042 67,307,113
6 CDS 67,307,371 67,307,436
7 CDS 67,307,549 67,307,737
8 CDS 67,307,846 67,307,939
9 CDS 67,308,174 67,308,302
10 CDS 67,308,412 67,308,458
11 CDS 67,309,397 67,309,543
12 CDS 67,309,768 67,309,968
13 CDS 67,310,066 67,310,339
14 CDS 67,311,591 67,311,887
Other genome
Genome Chromosome Start End Links
hg19 chr11 67,071,001 67,080,063 Link
CDS sequence
ATGGCCCTGGTCACAGTGAGCCGTTCGCCCCCGGGCAGCGGCGCCTCCACGCCCGTGGGGCCCTGGGACCAGGCGGTCCAGCGAAGGAGTCGACTCCAGCGAAGGCAGAGCTTTGCGGTGCTCCGTGGGGCTGTCCTGGGACTGCAGGATGGAGGGGACAATGATGATGCAGCAGAGGCCAGTTCTGAGCCAACAGAGAAGGCCCCGAGTGAGGAGGAGCTCCACGGGGACCAGACAGACTTCGGGCAAGGATCCCAGAGTCCCCAGAAGCAGGAGGAGCAGAGGCAGCACCTGCACCTCATGGTACAGCTGCTGAGGCCGCAGGATGACATCCGCCTGGCAGCCCAGCTGGAGGCACCCCGGCCTCCCCGGCTCCGCTACCTGCTGGTAGTTTCTACACGAGAAGGAGAAGGTCTGAGCCAGGATGAGACGGTCCTCCTGGGCGTGGATTTCCCTGACAGCAGCTCCCCCAGCTGCACCCTGGGCCTGGTCTTGCCCCTCTGGAGTGACACCCAGGTGTACTTAGATGGAGACGGGGGCTTCAGCGTGACGTCTGGTGGGCAAAGCCGGATCTTCAAGCCCATCTCCATCCAGACCATGTGGGCCACACTCCAGGTATTGCACCAAGCATGTGAGGCAGCTCTAGGCAGCGGCCTTGTACCGGGTGGCAGTGCCCTCACCTGGGCCAGCCACTACCAGGAGAGACTGAACTCCGAACAGAGCTGCCTCAATGAGTGGACGGCTATGGCCGACCTGGAGTCTCTGCGGCCTCCCAGCGCCGAGCCTGGCGGGTCCTCAGAACAGGAGCAGATGGAGCAGGCGATCCGTGCTGAGCTGTGGAAAGTGTTGGATGTCAGTGACCTGGAGAGTGTCACTTCCAAAGAGATCCGCCAGGCTCTGGAGCTGCGCCTGGGGCTCCCCCTCCAGCAGTACCGTGACTTCATCGACAACCAGATGCTGCTGCTGGTGGCACAGCGGGACCGAGCCTCCCGCATCTTCCCCCACCTCTACCTGGGCTCAGAGTGGAACGCAGCAAACCTGGAGGAGCTGCAGAGGAACAGGGTCACCCACATCTTGAACATGGCCCGGGAGATTGACAACTTCTACCCTGAGCGCTTCACCTACCACAATGTGCGCCTCTGGGATGAGGAGTCGGCCCAGCTGCTGCCGCACTGGAAGGAGACGCACCGCTTCATTGAGGCTGCAAGAGCACAGGGCACCCACGTGCTGGTCCACTGCAAGATGGGCGTCAGCCGCTCAGCGGCCACAGTGCTGGCCTATGCCATGAAGCAGTACGAATGCAGCCTGGAGCAGGCCCTGCGCCACGTGCAGGAGCTCCGGCCCATCGCCCGCCCCAACCCTGGCTTCCTGCGCCAGCTGCAGATCTACCAGGGCATCCTGACGGCCAGCCGCCAGAGCCATGTCTGGGAGCAGAAAGTGGGTGGGGTCTCCCCAGAGGAGCACCCAGCCCCTGAAGTCTCTACACCATTCCCACCTCTTCCGCCAGAACCTGAGGGTGGTGGGGAGGAGAAGGTTGTAGGCATGGAAGAGAGCCAGGCAGCCCCGAAAGAAGAGCCTGGGCCACGGCCACGTATAAACCTCCGAGGGGTCATGAGGTCCATCAGTCTTCTGGAGCCCTCCTTGGAGCTGGAGAGCACCTCAGAGACCAGTGACATGCCAGAGGTCTTCTCTTCCCACGAGTCTTCACATGAAGAGCCTCTGCAGCCCTTCCCACAGCTTGCAAGGACCAAGGGAGGCCAGCAGGTGGACAGGGGGCCTCAGCCTGCCCTGAAGTCCCGCCAGTCAGTGGTTACCCTCCAGGGCAGTGCCGTGGTGGCCAACCGGACCCAGGCCTTCCAGGAGCAGGAGCAGGGGCAGGGGCAGGGGCAGGGAGAGCCCTGCATTTCCTCTACGCCCAGGTTCCGGAAGGTGGTGAGACAGGCCAGCGTGCATGACAGTGGAGAGGAGGGCGAGGCCTGA
Amino sequence
MALVTVSRSPPGSGASTPVGPWDQAVQRRSRLQRRQSFAVLRGAVLGLQDGGDNDDAAEASSEPTEKAPSEEELHGDQTDFGQGSQSPQKQEEQRQHLHLMVQLLRPQDDIRLAAQLEAPRPPRLRYLLVVSTREGEGLSQDETVLLGVDFPDSSSPSCTLGLVLPLWSDTQVYLDGDGGFSVTSGGQSRIFKPISIQTMWATLQVLHQACEAALGSGLVPGGSALTWASHYQERLNSEQSCLNEWTAMADLESLRPPSAEPGGSSEQEQMEQAIRAELWKVLDVSDLESVTSKEIRQALELRLGLPLQQYRDFIDNQMLLLVAQRDRASRIFPHLYLGSEWNAANLEELQRNRVTHILNMAREIDNFYPERFTYHNVRLWDEESAQLLPHWKETHRFIEAARAQGTHVLVHCKMGVSRSAATVLAYAMKQYECSLEQALRHVQELRPIARPNPGFLRQLQIYQGILTASRQSHVWEQKVGGVSPEEHPAPEVSTPFPPLPPEPEGGGEEKVVGMEESQAAPKEEPGPRPRINLRGVMRSISLLEPSLELESTSETSDMPEVFSSHESSHEEPLQPFPQLARTKGGQQVDRGPQPALKSRQSVVTLQGSAVVANRTQAFQEQEQGQGQGQGEPCISSTPRFRKVVRQASVHDSGEEGEA*