ENST00000587327.5 PRKCSH
Information
- Transcript ID
- ENST00000587327.5
- Genome
- hg38
- Position
- chr19:11,435,745-11,450,867
- Strand
- +
- CDS length
- 1,578
- Amino acid length
- 526
- Gene symbol
- PRKCSH
- Gene type
- protein-coding
- Gene description
- PRKCSH beta subunit of glucosidase II
- Gene Entrez Gene ID
- 5589
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 11,435,745 | 11,436,196 |
| 2 | 11,436,389 | 11,436,505 |
| 3 | 11,437,876 | 11,437,971 |
| 4 | 11,438,067 | 11,438,124 |
| 5 | 11,441,240 | 11,441,357 |
| 6 | 11,442,386 | 11,442,515 |
| 7 | 11,445,389 | 11,445,473 |
| 8 | 11,446,272 | 11,446,350 |
| 9 | 11,447,074 | 11,447,160 |
| 10 | 11,447,439 | 11,447,618 |
| 11 | 11,447,723 | 11,447,789 |
| 12 | 11,448,222 | 11,448,291 |
| 13 | 11,448,540 | 11,448,629 |
| 14 | 11,448,914 | 11,448,988 |
| 15 | 11,449,076 | 11,449,175 |
| 16 | 11,449,266 | 11,449,428 |
| 17 | 11,450,646 | 11,450,867 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 11,436,118 | 11,436,196 |
| 2 | CDS | 11,436,389 | 11,436,505 |
| 3 | CDS | 11,437,876 | 11,437,971 |
| 4 | CDS | 11,438,067 | 11,438,124 |
| 5 | CDS | 11,441,240 | 11,441,357 |
| 6 | CDS | 11,442,386 | 11,442,515 |
| 7 | CDS | 11,445,389 | 11,445,473 |
| 8 | CDS | 11,446,272 | 11,446,350 |
| 9 | CDS | 11,447,074 | 11,447,160 |
| 10 | CDS | 11,447,439 | 11,447,618 |
| 11 | CDS | 11,447,723 | 11,447,789 |
| 12 | CDS | 11,448,222 | 11,448,291 |
| 13 | CDS | 11,448,540 | 11,448,629 |
| 14 | CDS | 11,448,914 | 11,448,988 |
| 15 | CDS | 11,449,076 | 11,449,175 |
| 16 | CDS | 11,449,266 | 11,449,412 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr19 | 11,546,566 | 11,561,682 | Link |
CDS sequence
ATGCTGTTGCCGCTGCTGCTGCTGCTACCCATGTGCTGGGCCGTGGAGGTCAAGAGGCCCCGGGGCGTCTCCCTCACCAATCATCACTTCTACGATGAGTCCAAGCCTTTCACCTGCCTGGACGGTTCGGCCACCATCCCATTTGATCAGGTCAACGATGACTATTGCGACTGCAAAGATGGCTCTGACGAGCCAGGCACGGCTGCCTGTCCTAATGGCAGCTTCCACTGCACCAACACTGGCTATAAGCCCCTGTATATCCCCTCCAACCGGGTCAACGATGGTGTTTGTGACTGCTGCGATGGAACAGACGAGTACAACAGCGGCGTCATCTGTGAGAACACCTGCAAAGAGAAGGGCCGTAAGGAGAGAGAGTCCCTGCAGCAGATGGCCGAGGTCACCCGCGAAGGGTTCCGTCTGAAGAAGATCCTTATTGAGGACTGGAAGAAGGCACGGGAGGAGAAGCAGAAAAAGCTCATTGAGCTACAGGCTGGGAAGAAGTCTCTGGAAGACCAGGTGGAGATGCTGCGGACAGTGAAGGAGGAAGCTGAGAAGCCAGAGAGAGAGGCCAAAGAGCAGCACCAGAAGCTGTGGGAAGAGCAGCTGGCTGCTGCCAAGGCCCAACAGGAGCAGGAGCTGGCGGCTGATGCCTTCAAGGAGCTGGATGATGACATGGACGGGACGGTCTCGGTGACTGAGCTGCAGACTCACCCGGAGCTGGACACAGATGGGGATGGGGCGTTGTCAGAAGCGGAAGCTCAGGCCCTCCTCAGTGGGGACACACAGACAGACGCCACCTCTTTCTACGACCGCGTCTGGGCCGCCATCAGGGACAAGTACCGGTCCGAGGCACTGCCCACCGACCTTCCAGCACCTTCTGCCCCTGACTTGACGGAGCCCAAGGAGGAGCAGCCGCCAGTGCCCTCGTCGCCCACAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAGGCTGAAGAAGAGGAGGAGGAGGAGGATTCCGAGGTGCAGGGGGAGCAGCCCAAGCCGGCCAGCCCTGCTGAGGAAGACAAAATGCCGCCCTACGACGAGCAGACGCAGGCCTTCATCGATGCTGCCCAGGAGGCCCGCAACAAGTTCGAGGAGGCCGAGCGGTCGCTGAAGGACATGGAGGAGTCCATCAGGAACCTGGAGCAAGAGATTTCTTTTGACTTTGGCCCCAACGGGGAGTTTGCTTACCTGTACAGCCAGTGCTACGAGCTCACCACCAACGAATACGTCTACCGCCTCTGCCCCTTCAAGCTTGTCTCGCAGAAACCCAAACTCGGGGGCTCTCCCACCAGCCTTGGCACCTGGGGCTCATGGATTGGCCCCGACCACGACAAGTTCAGTGCCATGAAGTATGAGCAAGGCACGGGCTGCTGGCAGGGCCCCAACCGCTCCACCACCGTGCGCCTCCTGTGCGGGAAAGAGACCATGGTGACCAGCACCACAGAGCCCAGTCGCTGCGAGTACCTCATGGAGCTGATGACGCCAGCCGCCTGCCCGGAGCCACCGCCTGAAGCACCCACCGAAGACGACCATGACGAGCTCTAG
Amino sequence
MLLPLLLLLPMCWAVEVKRPRGVSLTNHHFYDESKPFTCLDGSATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYIPSNRVNDGVCDCCDGTDEYNSGVICENTCKEKGRKERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADAFKELDDDMDGTVSVTELQTHPELDTDGDGALSEAEAQALLSGDTQTDATSFYDRVWAAIRDKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEVQGEQPKPASPAEEDKMPPYDEQTQAFIDAAQEARNKFEEAERSLKDMEESIRNLEQEISFDFGPNGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKLGGSPTSLGTWGSWIGPDHDKFSAMKYEQGTGCWQGPNRSTTVRLLCGKETMVTSTTEPSRCEYLMELMTPAACPEPPPEAPTEDDHDEL*