ENST00000567844.1 RNF166
Information
- Transcript ID
- ENST00000567844.1
- Genome
- hg38
- Position
- chr16:88,697,479-88,706,398
- Strand
- -
- CDS length
- 471
- Amino acid length
- 157
- Gene symbol
- RNF166
- Gene type
- protein-coding
- Gene description
- ring finger protein 166
- Gene Entrez Gene ID
- 115992
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 88,697,479 | 88,697,633 |
| 4 | 88,698,502 | 88,698,609 |
| 3 | 88,698,971 | 88,699,085 |
| 2 | 88,699,620 | 88,699,687 |
| 1 | 88,706,212 | 88,706,398 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 88,697,568 | 88,697,633 |
| 4 | CDS | 88,698,502 | 88,698,609 |
| 3 | CDS | 88,698,971 | 88,699,085 |
| 2 | CDS | 88,699,620 | 88,699,687 |
| 1 | CDS | 88,706,212 | 88,706,325 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr16 | 88,763,887 | 88,772,806 | Link |
CDS sequence
ATGGCTATGTTCCGCAGCCTGGTGGCCTCGGCTCAGCAGCGGCAGCCGCCGGCCGGGCCGGCGGGCGGCGACAGCGGCCTGGAGGCGCAGTACACCTGCCCCATCTGCCTGGAGGTCCAGGAGCAGATGGCCAACTGCCCCAAGTTCGTCCCCGTGGTGCCCACATCACAGCCTATCCCCAGCAACATCCCCAACAGGTCCACCTTCGCCTGCCCGTACTGTGGTGCCCGCAACCTGGACCAGCAGGAGCTGGTGAAGCACTGTGTGGAAAGCCACCGCAGCGACCCCAACCGCGTGGTGTGCCCCATCTGCTCGGCAATGCCCTGGGGGGACCCCAGCTACAAGAGCGCCAACTTCCTGCAGCACCTGCTTCACCGACACAAGTTCTCCTACGACACCTTTGTGGACTACAGTATTGACGAGGAGGCCGCCTTCCAGGCTGCTCTGGCCCTGTCTCTCTCTGAGAACTGA
Amino sequence
MAMFRSLVASAQQRQPPAGPAGGDSGLEAQYTCPICLEVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN*