ENST00000593209.5 GHDC

Information
Transcript ID
ENST00000593209.5
Genome
hg38
Position
chr17:42,188,799-42,194,459
Strand
-
CDS length
1,440
Amino acid length
480
Gene symbol
GHDC
Gene type
protein-coding
Gene description
GH3 domain containing
Gene Entrez Gene ID
84514
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
10 42,188,799 42,189,087
9 42,190,185 42,190,270
8 42,190,624 42,190,757
7 42,190,832 42,190,903
6 42,191,018 42,191,210
5 42,192,241 42,192,742
4 42,192,906 42,193,027
3 42,193,317 42,193,594
2 42,193,767 42,193,850
1 42,194,393 42,194,459
CDS
Exon number Type Start Stop
10 CDS 42,189,022 42,189,087
9 CDS 42,190,185 42,190,270
8 CDS 42,190,624 42,190,757
7 CDS 42,190,832 42,190,903
6 CDS 42,191,018 42,191,210
5 CDS 42,192,241 42,192,742
4 CDS 42,192,906 42,193,027
3 CDS 42,193,317 42,193,581
Other genome
Genome Chromosome Start End Links
hg19 chr17 40,340,817 40,346,477 Link
CDS sequence
ATGCTGCTGTGGCCACTGCTGCTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGGGGCCCTGGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTTACATCCCCTTGGCCCCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACGGCTGTCGAACTTCTGGATGTTTTCTTGGGCCTGGAGACTGATGGTGAAGAGCTAGCTGGGGCGATAGCTGCCGGGAACCCTGGAGCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGCTGCCCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTTCTCTCCTGCTTATGCTGCCTCGGGAGGGGTGCTGGGCCTAAACCTACAGCCAGAGCAGCCCCATGGGCTCTACCTTCTGCCCCCTGGGGCCCCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGGGTGATGTGGTGCGAGTGGTTGGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCGAGGGGAAGATATTGGTGAAGACCTGTTCTCTGAGGCCCTGGGCCGGGCAGTGGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGGCTGTGTGGAGAGCAGCATTCTGGATTCCTCTGCGGGCTCTGCTCCCCACTACGAGGTGTTTGTGGCGCTGAGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGACAAGATTCTTGCCTCAGGGTCTGCTTTGGGGAAACGGGAGTGGACCCCGGCCCAGCCATTCCCCCACTGA
Amino sequence
MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKILASGSALGKREWTPAQPFPH*