ENST00000524928.1 SLC39A13
Information
- Transcript ID
- ENST00000524928.1
- Genome
- hg38
- Position
- chr11:47,410,085-47,416,494
- Strand
- +
- CDS length
- 966
- Amino acid length
- 322
- Gene symbol
- SLC39A13
- Gene type
- protein-coding
- Gene description
- solute carrier family 39 member 13
- Gene Entrez Gene ID
- 91252
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 47,410,085 | 47,410,395 |
| 2 | 47,411,926 | 47,412,039 |
| 3 | 47,412,346 | 47,412,467 |
| 4 | 47,413,400 | 47,413,507 |
| 5 | 47,413,597 | 47,416,494 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 47,410,095 | 47,410,395 |
| 2 | CDS | 47,411,926 | 47,412,039 |
| 3 | CDS | 47,412,346 | 47,412,467 |
| 4 | CDS | 47,413,400 | 47,413,507 |
| 5 | CDS | 47,413,597 | 47,413,917 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 47,431,636 | 47,438,045 | Link |
CDS sequence
ATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCGGGCCCAAGGCTCCTCTTCCTCACTGCCCTTGCCCTGGAGCTCTTGGAAAGGGCTGGGGGTTCCCAGCCGGCCCTCCGGAGCCGGGGGACTGCGACGGCCTGTCGCCTGGACAACAAGGAAAGCGAGTCCTGGGGGGCTCTGCTGAGCGGAGAGCGGCTGGACACCTGGATCTGCTCCCTCCTGGGTTCCCTCATGGTGGGGCTCAGTGGGGTCTTCCCGTTGCTTGTCATTCCCCTAGAGATGGGGACCATGCTGCGCTCAGAAGCTGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTCGCCCTGGGGGGACTCTTGGGCAATGTGTTTCTGCATCTGCTGCCCGAAGCCTGGGCCTACACGTGCAGCGCCAGCCCTGGTGGTGAGGGGCAGAGCCTGCAGCAGCAGCAACAGCTGGGGCTGTGGGTCATTGCTGGCATCCTGACCTTCCTGGCGTTGGAGAAGATGTTCCTGGACAGCAAGGAGGAGGGGACCAGCCAGGCCCCCAACAAAGACCCCACTGCTGCTGCCGCCGCGCTCAATGGAGGCCACTGTCTGGCCCAGCCGGCTGCAGAGCCCGGCCTCGGTGCCGTGGTCCGGAGCATCAAAGTCAGCGGCTACCTCAACCTGCTGGCCAACACCATCGATAACTTCACCCACGGGCTGGCTGTGGCTGCCAGCTTCCTTGTGAGCAAGAAGGTGAGGGGCTTGGGGCCAGTGGGGCTCTGGCGATTCCAGTGGCAGCCATGTGGATTCCACCTGTGTCTGGAGTCTCTGCTTCTTGCCCCTCCATTGCCAGCGCCCTCATCTAAGGCTCTCATCCCCCATCCTCCCTGCTGCTGTCCTGGCCGCCACTGTTCTCTGATCCTGAGCCCCTGGTCTGTTCCTGTTCCCAGTACTCCTTGTTGGGTGCCTCTGTCAAGCTGCTAG
Amino sequence
MPGCPCPGCGMAGPRLLFLTALALELLERAGGSQPALRSRGTATACRLDNKESESWGALLSGERLDTWICSLLGSLMVGLSGVFPLLVIPLEMGTMLRSEAGAWRLKQLLSFALGGLLGNVFLHLLPEAWAYTCSASPGGEGQSLQQQQQLGLWVIAGILTFLALEKMFLDSKEEGTSQAPNKDPTAAAAALNGGHCLAQPAAEPGLGAVVRSIKVSGYLNLLANTIDNFTHGLAVAASFLVSKKVRGLGPVGLWRFQWQPCGFHLCLESLLLAPPLPAPSSKALIPHPPCCCPGRHCSLILSPWSVPVPSTPCWVPLSSC*