ENST00000361927.9 COLGALT2

Information
Transcript ID
ENST00000361927.9
Genome
hg38
Position
chr1:183,935,834-184,037,728
Strand
-
CDS length
1,881
Amino acid length
627
Gene symbol
COLGALT2
Gene type
protein-coding
Gene description
collagen beta(1-O)galactosyltransferase 2
Gene Entrez Gene ID
23127
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 183,935,834 183,939,037
11 183,940,581 183,940,787
10 183,944,196 183,944,323
9 183,945,432 183,945,564
8 183,951,007 183,951,113
7 183,954,762 183,954,838
6 183,963,901 183,964,020
5 183,969,269 183,969,473
4 183,973,616 183,973,750
3 183,975,097 183,975,214
2 183,978,410 183,978,520
1 184,037,095 184,037,728
CDS
Exon number Type Start Stop
12 CDS 183,938,761 183,939,037
11 CDS 183,940,581 183,940,787
10 CDS 183,944,196 183,944,323
9 CDS 183,945,432 183,945,564
8 CDS 183,951,007 183,951,113
7 CDS 183,954,762 183,954,838
6 CDS 183,963,901 183,964,020
5 CDS 183,969,269 183,969,473
4 CDS 183,973,616 183,973,750
3 CDS 183,975,097 183,975,214
2 CDS 183,978,410 183,978,520
1 CDS 184,037,095 184,037,357
Other genome
Genome Chromosome Start End Links
hg19 chr1 183,904,968 184,006,862 Link
CDS sequence
ATGGCTGCGCGCCCTGCTGCCACCCTCGCCTGGTCGCTACTGCTCCTCTCCTCAGCCCTGCTCCGCGAAGGCTGCCGAGCGCGCTTCGTCGCCGAGCGGGACTCGGAGGACGACGGAGAGGAGCCGGTGGTTTTCCCGGAGTCGCCCCTGCAGAGCCCCACGGTGCTCGTGGCGGTCCTCGCCCGCAACGCGGCGCACACGCTGCCGCACTTCCTCGGCTGCCTGGAGCGGCTGGACTACCCCAAGAGCAGGATGGCCATCTGGGCAGCCACTGATCACAATGTGGATAATACAACAGAAATATTCAGGGAGTGGTTGAAAAATGTACAGAGACTCTATCACTATGTGGAGTGGAGGCCTATGGATGAACCAGAGTCTTACCCTGATGAAATTGGACCAAAGCACTGGCCAACCTCCCGGTTTGCCCATGTGATGAAACTACGACAGGCAGCCCTTCGAACTGCGAGGGAAAAATGGTCAGACTACATTCTGTTCATAGATGTTGACAATTTCCTGACTAATCCACAGACCCTCAATCTACTGATTGCAGAAAACAAAACTATTGTGGCCCCCATGCTGGAGTCTCGGGGCCTGTATTCTAATTTCTGGTGCGGAATCACCCCTAAGGGCTTCTATAAGAGGACCCCAGACTACGTTCAGATTCGAGAATGGAAGAGGACAGGCTGCTTCCCCGTCCCCATGGTCCACTCCACCTTCCTAATTGACCTCAGGAAGGAGGCCTCGGACAAGCTGACTTTCTACCCCCCACACCAGGACTACACCTGGACCTTTGATGACATCATTGTCTTTGCCTTCTCCAGCAGGCAAGCAGGCATCCAGATGTACCTCTGCAACAGAGAGCACTATGGCTACCTGCCCATCCCCCTGAAGCCCCATCAGACACTGCAGGAAGACATCGAGAACCTCATCCATGTGCAGATTGAAGCAATGATTGACCGTCCTCCAATGGAACCCTCCCAGTATGTCTCAGTTGTCCCTAAATATCCAGACAAGATGGGATTTGATGAGATTTTCATGATAAACCTCAAACGCAGAAAGGACAGGCGGGACCGGATGCTGCGCACACTGTATGAACAGGAGATTGAGGTCAAGATTGTCGAGGCTGTGGATGGAAAGGCACTCAACACAAGCCAGCTGAAGGCACTGAATATTGAAATGCTGCCTGGCTATCGAGATCCCTATTCCTCCAGGCCTCTAACAAGGGGTGAAATCGGCTGCTTTCTCAGCCACTACTCAGTCTGGAAAGAGGTAATTGATCGAGAGCTAGAGAAGACTCTTGTAATTGAAGACGATGTGCGTTTTGAGCATCAGTTTAAGAAGAAGCTGATGAAGCTGATGGATAACATTGACCAGGCTCAGCTGGACTGGGAACTGATTTATATTGGTAGGAAGAGGATGCAAGTAAAGGAGCCAGAGAAAGCAGTGCCCAATGTGGCAAACCTGGTCGAAGCCGACTATTCCTACTGGACCCTGGGCTACGTCATCTCTCTGGAAGGAGCACAGAAGCTGGTTGGAGCCAATCCTTTTGGGAAGATGCTGCCAGTGGATGAGTTTCTGCCAGTCATGTACAACAAGCATCCCGTAGCCGAGTACAAGGAGTATTATGAATCCAGGGACCTGAAAGCCTTCTCTGCAGAACCCTTGCTCATCTACCCTACGCACTACACAGGCCAGCCGGGGTACCTGAGTGACACGGAGACCTCCACCATCTGGGACAATGAGACAGTGGCCACCGACTGGGATAGGACACATGCCTGGAAGTCCCGGAAGCAAAGCCGCATCTACAGCAATGCCAAGAACACAGAGGCCCTGCCACCGCCAACCTCCCTGGACACTGTGCCTTCAAGGGATGAGCTATGA
Amino sequence
MAARPAATLAWSLLLLSSALLREGCRARFVAERDSEDDGEEPVVFPESPLQSPTVLVAVLARNAAHTLPHFLGCLERLDYPKSRMAIWAATDHNVDNTTEIFREWLKNVQRLYHYVEWRPMDEPESYPDEIGPKHWPTSRFAHVMKLRQAALRTAREKWSDYILFIDVDNFLTNPQTLNLLIAENKTIVAPMLESRGLYSNFWCGITPKGFYKRTPDYVQIREWKRTGCFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYLPIPLKPHQTLQEDIENLIHVQIEAMIDRPPMEPSQYVSVVPKYPDKMGFDEIFMINLKRRKDRRDRMLRTLYEQEIEVKIVEAVDGKALNTSQLKALNIEMLPGYRDPYSSRPLTRGEIGCFLSHYSVWKEVIDRELEKTLVIEDDVRFEHQFKKKLMKLMDNIDQAQLDWELIYIGRKRMQVKEPEKAVPNVANLVEADYSYWTLGYVISLEGAQKLVGANPFGKMLPVDEFLPVMYNKHPVAEYKEYYESRDLKAFSAEPLLIYPTHYTGQPGYLSDTETSTIWDNETVATDWDRTHAWKSRKQSRIYSNAKNTEALPPPTSLDTVPSRDEL*