ENST00000301897.5 CCDC88B

Information
Transcript ID
ENST00000301897.5
Genome
hg38
Position
chr11:64,353,715-64,357,533
Strand
+
CDS length
420
Amino acid length
140
Gene symbol
CCDC88B
Gene type
protein-coding
Gene description
coiled-coil domain containing 88B
Gene Entrez Gene ID
283234
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,353,715 64,353,813
2 64,355,194 64,355,400
3 64,355,560 64,355,628
4 64,357,039 64,357,533
CDS
Exon number Type Start Stop
1 CDS 64,353,726 64,353,813
2 CDS 64,355,194 64,355,400
3 CDS 64,355,560 64,355,628
4 CDS 64,357,039 64,357,094
Other genome
Genome Chromosome Start End Links
hg19 chr11 64,121,187 64,125,005 Link
CDS sequence
ATGCCCTGCGCCGCGAGAAGCAGAAGCTCGTGGAGAAGATCATGGACCAATACCGCGTGCTGGAGCCTGTGCCCCTGCCCCGGACCAAGGTCCCCTTCCCCGGCACCCATGCGCCGGGCCCAGAGCTCCCTCTGCCTGCGGGATGAGACCTTGGCAGGCGGGCAGCGGCGGAAACTCAGCTCAAGGTTCCCGGTGGGGCGAAGCTCTGAGTCATTCAGCCCTGGGGACACCCCTAGGCAACGATTCCGACAGCGCCATCCAGGCCCCCTGGGGGCGCCCGTCTCCCACAGCAAAGGACCTGGTGTGGGATGGGAGAACTCCGCTGAGACCCTGCAGGAACACGAAACAGATGCCAACCGAGAGGGCCCTGAGGTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGA
Amino sequence
MPCAARSRSSWRRSWTNTACWSLCPCPGPRSPSPAPMRRAQSSLCLRDETLAGGQRRKLSSRFPVGRSSESFSPGDTPRQRFRQRHPGPLGAPVSHSKGPGVGWENSAETLQEHETDANREGPEVQEPEKRPLTPSLSQ*