ENST00000312106.6 CATSPER1
Information
- Transcript ID
- ENST00000312106.6
- Genome
- hg38
- Position
- chr11:66,016,752-66,026,479
- Strand
- -
- CDS length
- 2,343
- Amino acid length
- 781
- Gene symbol
- CATSPER1
- Gene type
- protein-coding
- Gene description
- cation channel sperm associated 1
- Gene Entrez Gene ID
- 117144
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 12 | 66,016,752 | 66,016,916 |
| 11 | 66,017,060 | 66,017,174 |
| 10 | 66,018,827 | 66,018,902 |
| 9 | 66,020,140 | 66,020,200 |
| 8 | 66,020,317 | 66,020,389 |
| 7 | 66,020,564 | 66,020,627 |
| 6 | 66,020,811 | 66,020,954 |
| 5 | 66,021,094 | 66,021,185 |
| 4 | 66,021,496 | 66,021,643 |
| 3 | 66,021,766 | 66,021,879 |
| 2 | 66,022,849 | 66,023,061 |
| 1 | 66,025,164 | 66,026,479 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 12 | CDS | 66,016,890 | 66,016,916 |
| 11 | CDS | 66,017,060 | 66,017,174 |
| 10 | CDS | 66,018,827 | 66,018,902 |
| 9 | CDS | 66,020,140 | 66,020,200 |
| 8 | CDS | 66,020,317 | 66,020,389 |
| 7 | CDS | 66,020,564 | 66,020,627 |
| 6 | CDS | 66,020,811 | 66,020,954 |
| 5 | CDS | 66,021,094 | 66,021,185 |
| 4 | CDS | 66,021,496 | 66,021,643 |
| 3 | CDS | 66,021,766 | 66,021,879 |
| 2 | CDS | 66,022,849 | 66,023,061 |
| 1 | CDS | 66,025,164 | 66,026,379 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr11 | 65,784,223 | 65,793,950 | Link |
CDS sequence
ATGGATCAAAACTCAGTGCCTGAAAAGGCTCAGAATGAGGCAGACACCAATAACGCAGATAGGTTCTTTCGCTCTCACTCATCACCCCCACACCACAGGCCAGGCCACAGCAGAGCTCTCCACCATTACGAGTTGCACCATCACGGCGTGCCCCACCAACGTGGTGAATCTCACCACCCTCCGGAGTTCCAAGACTTCCACGACCAAGCCTTGTCCTCCCATGTCCACCAATCTCACCACCACAGCGAGGCACGGAATCACGGCAGAGCCCATGGCCCCACAGGCTTTGGTCTGGCTCCCTCTCAAGGCGCCGTCCCCTCCCACCGTTCCTACGGTGAGGACTACCATGATGAGCTCCAACGTGATGGCAGGAGGCATCATGATGGGTCCCAATACGGTGGGTTCCATCAGCAGAGTGACTCCCATTACCATAGGGGGTCTCACCATGGCAGACCCCAATATCTCGGTGAGAATTTATCCCACTATTCCTCTGGCGTGCCCCACCACGGTGAGGCTTCCCACCATGGTGGGTCCTACCTCCCCCATGGACCCAATCCCTACAGTGAGTCCTTCCACCACAGCGAGGCTTCCCACCTTAGCGGGCTCCAACACGATGAGTCCCAGCATCACCAAGTCCCCCACCGTGGCTGGCCCCACCATCACCAAGTCCACCACCATGGCAGGTCCCGTCATCATGAAGCCCACCAGCATGGAAAGTCTCCTCATCACGGAGAGACCATTTCCCCTCATTCCTCTGTGGGGTCCTACCAGCGTGGGATATCTGACTATCACAGCGAGTACCACCAAGGTGATCACCACCCCAGTGAGTACCACCATGGCGACCATCCCCACCACACACAGCACCACTACCACCAGACCCACCGGCACCGAGACTACCATCAGCACCAAGACCACCACGGCGCGTATCATTCCAGTTACCTCCATGGCGACTACGTCCAGAGCACTTCCCAACTCTCTATCCCACACACATCCCGGAGCCTGATTCACGATGCCCCCGGCCCTGCTGCTTCTCGTACAGGAGTCTTCCCCTATCACGTAGCACACCCACGGGGCTCGGCTCACAGCATGACTCGGTCCTCCAGCACAATCCGCTCACGTGTCACCCAGATGTCCAAAAAAGTCCATACCCAGGATATCTCCACCAAACATTCAGAAGACTGGGGCAAAGAAGAAGGGCAATTTCAGAAACGCAAAACCGGCCGGCTCCAGCGGACCCGCAAGAAGGGACACTCTACCAATCTCTTCCAGTGGCTGTGGGAAAAGCTAACCTTCCTCATTCAGGGCTTCCGGGAAATGATCCGGAACCTGACCCAATCCTTGGCCTTTGAAACTTTCATCTTCTTCGTTGTCTGCCTCAACACCGTCATGCTGGTGGCCCAGACCTTCGCTGAAGTCGAGATCCGGGGCGAGTGGTACTTCATGGCCTTGGACTCCATATTCTTCTGCATCTACGTGGTGGAAGCCCTGCTCAAGATCATCGCCCTGGGCCTCTCGTACTTCTTTGACTTCTGGAACAATTTGGACTTCTTCATTATGGCCATGGCCGTGCTGGACTTCTTGCTGATGCAGACCCACTCCTTCGCCATCTACCACCAAAGCCTCTTCCGGATCCTCAAGGTCTTCAAGAGCCTGCGGGCCCTGAGGGCAATCCGGGTCCTGCGGAGGCTCAGCTTCCTGACCAGCGTCCAGGAAGTGACAGGGACCCTGGGCCAGTCCTTGCCGTCCATCGCAGCCATCCTCATCCTCATGTTTACCTGCCTCTTCCTCTTCTCCGCGGTCCTCCGGGCACTGTTCCGCAAATCTGACCCCAAGCGCTTCCAGAACATCTTCACCACCATCTTCACCCTCTTCACCTTGCTCACGCTGGATGACTGGTCCCTCATCTACATGGACAGCCGTGCCCAGGGCGCCTGGTACATCATTCCCATCCTCGTAATTTACATCATCATCCAGTACTTCATCTTCCTCAACCTGGTGATTACTGTCCTGGTGGATAGCTTCCAGACGGCGCTGTTCAAAGGCCTTGAGAAAGCGAAGCAGGAGAGGGCCGCCCGGATCCAAGAGAAGCTGCTGGAAGACTCACTGACGGAGCTCAGAGCTGCAGAGCCCAAAGAGGTGGCGAGTGAAGGCACCATGCTGAAGCGGCTCATCGAGAAAAAGTTTGGGACCATGACTGAGAAGCAGCAGGAGCTCCTGTTCCATTACCTGCAGCTGGTGGCAAGCGTGGAGCAGGAGCAGCAGAAGTTCCGCTCCCAGGCAGCCGTCATCGATGAGATTGTGGACACCACATTTGAGGCTGGAGAAGAGGACTTCAGGAATTGA
Amino sequence
MDQNSVPEKAQNEADTNNADRFFRSHSSPPHHRPGHSRALHHYELHHHGVPHQRGESHHPPEFQDFHDQALSSHVHQSHHHSEARNHGRAHGPTGFGLAPSQGAVPSHRSYGEDYHDELQRDGRRHHDGSQYGGFHQQSDSHYHRGSHHGRPQYLGENLSHYSSGVPHHGEASHHGGSYLPHGPNPYSESFHHSEASHLSGLQHDESQHHQVPHRGWPHHHQVHHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSEYHQGDHHPSEYHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQSTSQLSIPHTSRSLIHDAPGPAASRTGVFPYHVAHPRGSAHSMTRSSSTIRSRVTQMSKKVHTQDISTKHSEDWGKEEGQFQKRKTGRLQRTRKKGHSTNLFQWLWEKLTFLIQGFREMIRNLTQSLAFETFIFFVVCLNTVMLVAQTFAEVEIRGEWYFMALDSIFFCIYVVEALLKIIALGLSYFFDFWNNLDFFIMAMAVLDFLLMQTHSFAIYHQSLFRILKVFKSLRALRAIRVLRRLSFLTSVQEVTGTLGQSLPSIAAILILMFTCLFLFSAVLRALFRKSDPKRFQNIFTTIFTLFTLLTLDDWSLIYMDSRAQGAWYIIPILVIYIIIQYFIFLNLVITVLVDSFQTALFKGLEKAKQERAARIQEKLLEDSLTELRAAEPKEVASEGTMLKRLIEKKFGTMTEKQQELLFHYLQLVASVEQEQQKFRSQAAVIDEIVDTTFEAGEEDFRN*