ENST00000511209.5 GPBP1

Information
Transcript ID
ENST00000511209.5
Genome
hg38
Position
chr5:57,175,946-57,263,085
Strand
+
CDS length
1,398
Amino acid length
466
Gene symbol
GPBP1
Gene type
protein-coding
Gene description
GC-rich promoter binding protein 1
Gene Entrez Gene ID
65056
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 57,175,946 57,176,400
2 57,214,074 57,214,193
3 57,221,376 57,221,396
4 57,230,846 57,230,969
5 57,231,098 57,231,321
6 57,235,966 57,236,032
7 57,246,300 57,246,484
8 57,247,075 57,247,215
9 57,249,454 57,249,576
10 57,250,954 57,251,141
11 57,261,180 57,261,282
12 57,262,594 57,263,085
CDS
Exon number Type Start Stop
2 CDS 57,214,131 57,214,193
3 CDS 57,221,376 57,221,396
4 CDS 57,230,846 57,230,969
5 CDS 57,231,098 57,231,321
6 CDS 57,235,966 57,236,032
7 CDS 57,246,300 57,246,484
8 CDS 57,247,075 57,247,215
9 CDS 57,249,454 57,249,576
10 CDS 57,250,954 57,251,141
11 CDS 57,261,180 57,261,282
12 CDS 57,262,594 57,262,752
Other genome
Genome Chromosome Start End Links
hg19 chr5 56,471,773 56,558,912 Link
CDS sequence
ATGGCGCAGCATGACTTTGCTCCAGCCTGGCTTAATTTCCCTACTCCACCATCATCAACAAAGGTCCTGACCAGCAGTTTGAAATCGTCATTGAATTTTGAGAAGCATTCTGAAAACTTTGCATGGACAGAGAATCGTTATGATGTGAACCGTCGACGACACAACTCTTCAGATGGCTTTGATTCTGCTATTGGGCGTCCTAATGGAGGTAACTTTGGAAGGAAAGAAAAAAATGGATGGCGTACACATGGAAGAAATGGTACAGAAAACATAAATCATCGAGGTGGATACCATGGTGGAAGTTCCCGTTCTCGTAGCAGTATTTTCCATGCAGGAAAAAGCCAAGGACTACATGAAAACAACATACCTGACAATGAAACCGGGAGGAAAGAAGACAAGAGAGAACGCAAACAGTTTGAAGCTGAGGATTTTCCGTCTTTAAATCCTGAGTATGAGAGAGAACCAAATCACAATAAGTCTTTAGCTGCAGGTGTGTGGGAATATCCTCCGAATCCTAAATCTAGAGCTCCAAGGATGCTGGTCATTAAGAAAGGTAATACAAAAGACTTACAGCTATCTGGATTCCCAGTAGTAGGAAATCTTCCGTCACAGCCAGTTAAGAATGGAACTGGTCCAAGTGTTTATAAAGGTTTAGTCCCTAAACCTGCTGCTCCACCTACAAAACCTACACAATGGAAAAGCCAAACAAAAGAAAATAAAGTTGGAACTTCTTTCCCTCATGAGTCCACATTTGGCGTTGGCAACTTTAATGCTTTTAAATCAACTGCCAAGAACTTTAGTCCATCTACAAATTCAGTGAAAGAGCAGCCTCGTCTAACCAAACTGACACGAATGCGCACTGATAAGAAGAGTGAATTTTTGAAAGCATTGAAAAGAGACAGAGTAGAAGAGGAACATGAAGATGAAAGCCGTGCTGGCTCAGAGAAGGATGACGACTCATTTAATTTACATAACAGCAATAGTACTCACCAAGAAAGGGATATAAACCGAAACTTCGATGAAAATGAAATTCCTCAAGAGAATGGCAATGCCTCAGTGATTTCCCAGCAGATCATTCGGTCTTCAACCTTCCCACAAACTGATGTTCTTTCAAGTTCACTTGAGGCAGAACACAGATTGTTAAAGGAAATGGGCTGGCAGGAAGACAGTGAAAATGATGAAACATGTGCTCCCTTAACTGAGGATGAAATGAGAGAATTCCAAGTTATTAGTGAACAGTTACAGAAGAATGGTCTGAGAAAAAATGGTATTTTGAAAAATGGCTTGATCTGTGACTTCAAGTTTGGACCGTGGAAGAACAGCACTTTCAAACCCACAACTGAGAATGATGACACAGAGACAAGTAGCAGTGATACATCAGATGACGACGATGTGTGA
Amino sequence
MAQHDFAPAWLNFPTPPSSTKVLTSSLKSSLNFEKHSENFAWTENRYDVNRRRHNSSDGFDSAIGRPNGGNFGRKEKNGWRTHGRNGTENINHRGGYHGGSSRSRSSIFHAGKSQGLHENNIPDNETGRKEDKRERKQFEAEDFPSLNPEYEREPNHNKSLAAGVWEYPPNPKSRAPRMLVIKKGNTKDLQLSGFPVVGNLPSQPVKNGTGPSVYKGLVPKPAAPPTKPTQWKSQTKENKVGTSFPHESTFGVGNFNAFKSTAKNFSPSTNSVKEQPRLTKLTRMRTDKKSEFLKALKRDRVEEEHEDESRAGSEKDDDSFNLHNSNSTHQERDINRNFDENEIPQENGNASVISQQIIRSSTFPQTDVLSSSLEAEHRLLKEMGWQEDSENDETCAPLTEDEMREFQVISEQLQKNGLRKNGILKNGLICDFKFGPWKNSTFKPTTENDDTETSSSDTSDDDDV*