ENST00000639673.3 TRIM43B
Information
- Transcript ID
- ENST00000639673.3
- Genome
- hg38
- Position
- chr2:95,477,008-95,484,754
- Strand
- -
- CDS length
- 1,341
- Amino acid length
- 447
- Gene symbol
- TRIM43B
- Gene type
- protein-coding
- Gene description
- tripartite motif containing 43B
- Gene Entrez Gene ID
- 653192
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
7 | 95,477,008 | 95,477,645 |
6 | 95,478,760 | 95,478,857 |
5 | 95,479,386 | 95,479,408 |
4 | 95,480,305 | 95,480,535 |
3 | 95,481,595 | 95,481,690 |
2 | 95,482,304 | 95,482,718 |
1 | 95,484,606 | 95,484,754 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
7 | CDS | 95,477,164 | 95,477,645 |
6 | CDS | 95,478,760 | 95,478,857 |
5 | CDS | 95,479,386 | 95,479,408 |
4 | CDS | 95,480,305 | 95,480,535 |
3 | CDS | 95,481,595 | 95,481,690 |
2 | CDS | 95,482,304 | 95,482,714 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg19 | chr2 | 96,142,756 | 96,150,502 | Link |
CDS sequence
ATGGACTCAGACTTCTCACATGCCTTCCAGAAGGAACTCACCTGTGTCATCTGTTTGAACTACCTGGTAGACCCTGTCACCATCTGCTGTGGGCACAGCTTCTGTAGGCCCTGTCTCTGCCTTTCGTGGGAGGAAGCCCAAAGTCCTGCAAACTGCCCTGCATGCAGGGAACCATCACCGAAAATGGACTTCAAAACCAATATTCTTCTGAAGAATTTAGTGACCATTGCCAGAAAAGCCAGTCTCTGGCAATTCCTGAGCTCTGAGAAACAAATATGTGGGACCCATAGGCAAACAAAGAAGATGTTCTGTGACATGGACAAGAGTCTCCTCTGCTTGCTGTGCTCCAACTCTCAGGAGCACGGGGCTCACAAACACTATCCCATCGAAGAGGCAGCTGAGGAAGACCGGGAGAAACTCTTAAAGCAAATGAGGATTTTATGGAAAAAGATTCAAGAAAATCAGAGAAATCTATATGAGGAGAGAAGAACAGCCTTCCTCTTGAGGGGCGATGTGGTTTTACGGGCACAGATGATCAGGAATGAGTATAGGAAGCTGCATCCGGTTCTCCATAAGGAAGAAAAACAACATTTAGAGAGACTGAACAAGGAATACCAAGAGATTTTTCAGCAACTCCAGAGAAGTTGGGTCAAAATGGATCAAAAGAGTAAACACTTGAAAGAAATGTATCAGGAACTAATGGAAATGTGTCATAAACCAGAGGTGGAGCTGCTCCAGGATTTGGGAGACATCGTGGCAAGGAGTGAGTCCGTGCTGCTGCACATGCCCCAGCCTGTGAATCCAGAGCTCACTGCAGGACCCATCACTGGACTGGTGTACAGGCTCAACCGCTTCCGAGTGGAAATTTCCTTCCATTTTGAAGTAACCAATCACAATATCAGGCTCTTTGAGGATGTGAGAAGTTGGATGTTTAGACGTGGACCTTTGAATTCTGACAGATCTGACTATTTTGCTGCATGGGGAGCCAGGGTCTTCTCCTTTGGGAAACACTACTGGGAGCTGGATGTGGACAACTCTTGTGACTGGGCTCTGGGAGTCTGTAACAACTCCTGGATAAGGAAGAATAGCACAATGGTTAACTCTGAGGACATATTTCTTCTTTTGTGTCTGAAGGTGGATAATCATTTCAATCTCTTGACCACCTCCCCAGTGTTTCCTCACTACATAGAGAAACCTCTGGGCCGGGTTGGTGTGTTTCTTGATTTTGAAAGTGGAAGTGTGAGTTTTTTGAATGTCACCAAGAGTTCCCTCATATGGAGTTACCCAGCTGGCTCCTTAACTTTTCCTGTCAGGCCTTTCTTTTACACTGGCCACAGATGA
Amino sequence
MDSDFSHAFQKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPANCPACREPSPKMDFKTNILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLLCSNSQEHGAHKHYPIEEAAEEDREKLLKQMRILWKKIQENQRNLYEERRTAFLLRGDVVLRAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELMEMCHKPEVELLQDLGDIVARSESVLLHMPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNIRLFEDVRSWMFRRGPLNSDRSDYFAAWGARVFSFGKHYWELDVDNSCDWALGVCNNSWIRKNSTMVNSEDIFLLLCLKVDNHFNLLTTSPVFPHYIEKPLGRVGVFLDFESGSVSFLNVTKSSLIWSYPAGSLTFPVRPFFYTGHR*