ENST00000389005.6 NCBP3
Information
- Transcript ID
- ENST00000389005.6
- Genome
- hg38
- Position
- chr17:3,802,158-3,846,246
- Strand
- -
- CDS length
- 1,863
- Amino acid length
- 621
- Gene symbol
- NCBP3
- Gene type
- protein-coding
- Gene description
- nuclear cap binding subunit 3
- Gene Entrez Gene ID
- 55421
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 13 | 3,802,158 | 3,813,279 |
| 12 | 3,814,322 | 3,814,483 |
| 11 | 3,816,116 | 3,816,270 |
| 10 | 3,818,263 | 3,818,572 |
| 9 | 3,821,249 | 3,821,352 |
| 8 | 3,821,953 | 3,822,052 |
| 7 | 3,824,942 | 3,825,050 |
| 6 | 3,825,767 | 3,825,843 |
| 5 | 3,826,087 | 3,826,215 |
| 4 | 3,829,243 | 3,829,368 |
| 3 | 3,840,100 | 3,840,205 |
| 2 | 3,843,086 | 3,843,151 |
| 1 | 3,846,041 | 3,846,246 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 13 | CDS | 3,813,044 | 3,813,279 |
| 12 | CDS | 3,814,322 | 3,814,483 |
| 11 | CDS | 3,816,116 | 3,816,270 |
| 10 | CDS | 3,818,263 | 3,818,572 |
| 9 | CDS | 3,821,249 | 3,821,352 |
| 8 | CDS | 3,821,953 | 3,822,052 |
| 7 | CDS | 3,824,942 | 3,825,050 |
| 6 | CDS | 3,825,767 | 3,825,843 |
| 5 | CDS | 3,826,087 | 3,826,215 |
| 4 | CDS | 3,829,243 | 3,829,368 |
| 3 | CDS | 3,840,100 | 3,840,205 |
| 2 | CDS | 3,843,086 | 3,843,151 |
| 1 | CDS | 3,846,041 | 3,846,223 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 3,705,452 | 3,749,540 | Link |
CDS sequence
ATGGCGGCCGTACGGGGCCTGCGGGTGTCGGTGAAGGCGGAGGCCCCGGCGGGGCCGGCCCTGGGGCTCCCGTCCCCTGAGGCGGAGTCCGGTGTTGACCGTGGCGAGCCGGAGCCCATGGAGGTGGAGGAGGGCGAGCTGGAAATCGTGCCTGTGCGGCGCTCGCTCAAGGAACTGATCCCGGACACGAGCAGAAGATATGAAAACAAGGCTGGCAGCTTCATCACTGGAATTGATGTCACCTCCAAGGAAGCAATTGAAAAGAAAGAGCAGCGAGCCAAGCGCTTCCATTTTCGATCGGAAGTAAATCTTGCCCAAAGAAATGTAGCCTTGGACCGAGACATGATGAAGAAAGCAATCCCCAAGGTGAGACTGGAGACAATCTATATTTGCGGAGTAGATGAGATGAGCACCCAAGATGTCTTTTCCTATTTTAAAGAATATCCTCCAGCTCACATCGAATGGTTGGATGATACCTCCTGTAATGTAGTTTGGCTGGATGAAATGACAGCCACACGAGCACTTATCAATATGAGCTCCCTGCCTGCACAGGATAAGATCAGAAGCAGGGATGCCAGTGAGGACAAGTCAGCTGAGAAAAGGAAAAAAGACAAGCAGGAAGACAGTTCAGATGATGATGAAGCTGAAGAAGGAGAGGTTGAAGATGAGAACTCAAGTGATGTAGAGTTGGATACGTTGTCTCAGGTAGAAGAGGAGTCTTTGTTAAGAAACGATCTTCGTCCAGCTAACAAACTTGCTAAAGGAAATAGGTTATTCATGAGATTTGCTACAAAAGATGACAAAAAGGAACTTGGAGCAGCCAGAAGAAGTCAGTATTACATGAAATATGGGAATCCAAATTATGGAGGCATGAAAGGAATTCTTAGCAATTCATGGAAGCGAAGATATCATTCCCGTCGTATTCAGCGGGACGTGATCAAGAAGAGAGCCCTGATTGGGGATGACGTTGGCTTGACGTCGTATAAACATCGACATTCTGGGCTAGTGAATGTTCCCGAGGAACCCATTGAAGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAAGAAGACCAGGACATGGATGCAGATGACAGAGTGGTGGTAGAGTACCACGAGGAGCTCCCGGCTCTCAAGCAGCCCCGGGAGCGGAGCGCGTCTAGACGATCCAGTGCCAGCAGCTCAGACTCAGATGAAATGGACTATGATCTAGAACTGAAAATGATTTCCACGCCTTCACCAAAGAAAAGCATGAAAATGACTATGTATGCTGACGAAGTGGAATCTCAGTTGAAAAATATTAGGAACTCCATGAGGGCAGATAGTGTATCTTCAAGCAATATCAAAAACCGAATTGGTAACAAATTACCACCTGAGAAATTTGCAGATGTCCGACATCTATTAGATGAGAAACGTCAGCACTCCCGTCCACGGCCACCAGTCAGCAGTACTAAATCAGATATACGCCAGCGGTTAGGAAAAAGACCACATTCTCCGGAAAAGGCTTTTAGTAGTAACCCCGTCGTTCGGAGAGAGCCCTCTTCTGATGTGCATAGTAGGCTAGGTGTTCCCAGGCAGGATAGTAAAGGCCTCTACGCCGATACTCGGGAGAAGAAATCAGGTAATTTATGGACTCGCCTAGGATCTGCACCCAAGACCAAAGAAAAGAATACGAAGAAAGTGGATCACAGGGCGCCTGGCGCTGAGGAAGACGACTCTGAGCTGCAAAGGGCATGGGGGGCTCTGATTAAGGAGAAAGAGCAGTCTCGCCAAAAGAAGAGCCGGTTAGATAACTTACCATCTCTCCAGATTGAAGTTAGTCGGGAAAGCAGCTCTGGTTCAGAGGCAGAGTCCTGA
Amino sequence
MAAVRGLRVSVKAEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRRSLKELIPDTSRRYENKAGSFITGIDVTSKEAIEKKEQRAKRFHFRSEVNLAQRNVALDRDMMKKAIPKVRLETIYICGVDEMSTQDVFSYFKEYPPAHIEWLDDTSCNVVWLDEMTATRALINMSSLPAQDKIRSRDASEDKSAEKRKKDKQEDSSDDDEAEEGEVEDENSSDVELDTLSQVEEESLLRNDLRPANKLAKGNRLFMRFATKDDKKELGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIQRDVIKKRALIGDDVGLTSYKHRHSGLVNVPEEPIEEEEEEEEEEEEEEEEDQDMDADDRVVVEYHEELPALKQPRERSASRRSSASSSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSVSSSNIKNRIGNKLPPEKFADVRHLLDEKRQHSRPRPPVSSTKSDIRQRLGKRPHSPEKAFSSNPVVRREPSSDVHSRLGVPRQDSKGLYADTREKKSGNLWTRLGSAPKTKEKNTKKVDHRAPGAEEDDSELQRAWGALIKEKEQSRQKKSRLDNLPSLQIEVSRESSSGSEAES*