ENST00000270061.12 SSBP4

Information
Transcript ID
ENST00000270061.12
Genome
hg38
Position
chr19:18,419,398-18,434,562
Strand
+
CDS length
1,158
Amino acid length
386
Gene symbol
SSBP4
Gene type
protein-coding
Gene description
single stranded DNA binding protein 4
Gene Entrez Gene ID
170463
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 18,419,398 18,419,707
2 18,427,351 18,427,423
3 18,427,752 18,427,813
4 18,427,898 18,427,982
5 18,430,841 18,430,930
6 18,431,353 18,431,418
7 18,431,647 18,431,706
8 18,431,793 18,431,862
9 18,432,000 18,432,070
10 18,432,147 18,432,214
11 18,432,559 18,432,604
12 18,432,700 18,432,735
13 18,432,829 18,432,883
14 18,432,973 18,433,043
15 18,433,135 18,433,213
16 18,433,585 18,433,613
17 18,433,710 18,433,817
18 18,434,217 18,434,562
CDS
Exon number Type Start Stop
1 CDS 18,419,649 18,419,707
2 CDS 18,427,351 18,427,423
3 CDS 18,427,752 18,427,813
4 CDS 18,427,898 18,427,982
5 CDS 18,430,841 18,430,930
6 CDS 18,431,353 18,431,418
7 CDS 18,431,647 18,431,706
8 CDS 18,431,793 18,431,862
9 CDS 18,432,000 18,432,070
10 CDS 18,432,147 18,432,214
11 CDS 18,432,559 18,432,604
12 CDS 18,432,700 18,432,735
13 CDS 18,432,829 18,432,883
14 CDS 18,432,973 18,433,043
15 CDS 18,433,135 18,433,213
16 CDS 18,433,585 18,433,613
17 CDS 18,433,710 18,433,817
18 CDS 18,434,217 18,434,246
Other genome
Genome Chromosome Start End Links
hg19 chr19 18,530,208 18,545,372 Link
CDS sequence
ATGTACGCCAAGGGGGGCAAGGGTTCGGCCGTGCCCTCCGACAGCCAGGCCCGCGAGAAGTTGGCGCTGTACGTTTATGAGTACCTGCTGCACATCGGTGCCCAGAAGTCAGCCCAGACCTTCCTGTCTGAGATCCGATGGGAGAAGAACATCACGCTGGGGGAGCCCCCTGGGTTCCTGCACTCCTGGTGGTGCGTCTTCTGGGACCTGTACTGCGCGGCGCCTGACAGAAGAGAGGCCTGCGAGCACTCCGGCGAGGCCAAGGCCTTCCAGGACTATAGTGCTGCAGCCGCCCCCAGCCCCGTTATGGGGAGTATGGCCCCAGGTGACACAATGGCCGCAGGCTCCATGGCGGCTGGCTTCTTCCAGGGCCCCCCCGGCTCCCAGCCGTCCCCCCACAACCCCAACGCCCCCATGATGGGGCCTCACGGTCAGCCCTTCATGTCACCGCGCTTCCCAGGGGGCCCCCGGCCCACCCTGCGGATGCCGAGTCAGCCTCCCGCAGGCCTCCCTGGCTCCCAGCCCCTCCTCCCTGGCGCCATGGAGCCCTCCCCACGAGCCCAGGGGCATCCGAGCATGGGCGGCCCAATGCAGAGGGTGACGCCTCCTCGTGGCATGGCCAGCGTGGGGCCCCAGAGCTATGGAGGTGGCATGCGACCCCCACCCAACTCCCTCGCCGGCCCAGGCCTGCCTGCCATGAACATGGGCCCAGGAGTTCGTGGCCCGTGGGCCAGCCCCAGTGGAAACTCGATCCCCTACTCCTCCTCATCCCCCGGCAGCTACACCGGACCCCCAGGAGGAGGTGGGCCCCCTGGAACACCCATCATGCCTAGCCCTGGAGATTCCACCAACTCCAGCGAAAACATGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTCCCGCTCGGCCCTGGCCCGGAGGGCCCCATGGCCGCCATGAGCGCGATGGAGCCTCACCACGTGAACGGATCCCTGGGCTCGGGCGACATGGACGGGTTGCCGAAGAGTTCCCCCGGCGCCGTGGCCGGCCTGAGCAACGCCCCGGGCACCCCGCGGGACGACGGCGAGATGGCGGCCGCCGGGACCTTCCTGCACCCGTTCCCGAGCGAAAGCTACTCGCCAGGGATGACCATGAGCGTGTGA
Amino sequence
MYAKGGKGSAVPSDSQAREKLALYVYEYLLHIGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRREACEHSGEAKAFQDYSAAAAPSPVMGSMAPGDTMAAGSMAAGFFQGPPGSQPSPHNPNAPMMGPHGQPFMSPRFPGGPRPTLRMPSQPPAGLPGSQPLLPGAMEPSPRAQGHPSMGGPMQRVTPPRGMASVGPQSYGGGMRPPPNSLAGPGLPAMNMGPGVRGPWASPSGNSIPYSSSSPGSYTGPPGGGGPPGTPIMPSPGDSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDMDGLPKSSPGAVAGLSNAPGTPRDDGEMAAAGTFLHPFPSESYSPGMTMSV*