ENST00000405531.7 REDIC1
Information
- Transcript ID
- ENST00000405531.7
- Genome
- hg38
- Position
- chr12:39,626,167-39,692,187
- Strand
- +
- CDS length
- 1,434
- Amino acid length
- 478
- Gene symbol
- REDIC1
- Gene type
- protein-coding
- Gene description
- regulator of DNA class I crossover intermediates 1
- Gene Entrez Gene ID
- 283461
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 39,626,167 | 39,626,359 |
| 2 | 39,640,955 | 39,640,994 |
| 3 | 39,643,779 | 39,643,917 |
| 4 | 39,646,329 | 39,646,461 |
| 5 | 39,646,840 | 39,646,888 |
| 6 | 39,647,792 | 39,647,977 |
| 7 | 39,650,239 | 39,650,354 |
| 8 | 39,682,611 | 39,683,140 |
| 9 | 39,683,415 | 39,683,484 |
| 10 | 39,684,867 | 39,684,927 |
| 11 | 39,692,049 | 39,692,187 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 39,626,337 | 39,626,359 |
| 2 | CDS | 39,640,955 | 39,640,994 |
| 3 | CDS | 39,643,779 | 39,643,917 |
| 4 | CDS | 39,646,329 | 39,646,461 |
| 5 | CDS | 39,646,840 | 39,646,888 |
| 6 | CDS | 39,647,792 | 39,647,977 |
| 7 | CDS | 39,650,239 | 39,650,354 |
| 8 | CDS | 39,682,611 | 39,683,140 |
| 9 | CDS | 39,683,415 | 39,683,484 |
| 10 | CDS | 39,684,867 | 39,684,927 |
| 11 | CDS | 39,692,049 | 39,692,135 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr12 | 40,019,969 | 40,085,989 | Link |
CDS sequence
ATGAATTGGGTCGGGGGGTCCCGGTCCAGGGTTCTGATCAAGCAGGAAAGAAGAAAGCAAAAGGAATATTTTGAAAAACACAGGTTAAAATCAAAAATGAAATCACTGGGAGTTTTATCTCCTGTCAAAAATTCTGCTGTCAGCTTAGACATTCTTAACCTATATATGGTAAATCAGATATCTTGCAAGAAGAAAATTCCTGAAACTGTGAGAAAACCAACCCATGTGAACATGAATAGAGACATAAAAATGCCCCTAAGAAAGCATAATTTAGAACTTACAATGTCGCCTCACTGTGTACCTTCTAAACTCTGCCTTGATGATACAGAAACCAATGTAAACTGTCAAAGACTAAGTAGCAAGGAAGATCTTGGCCCAGTCCAGTCACAAGGCATGGACTCATATAGTATGCTTCACCCTCAGTTCAGCAAAATAGAGAACTGCAGTTTCACTCCATCATCTTTTTCAGTGGAGTTACCTTCTAACAGACATATTTCAAAACTAAATTTCACATCTGGAATAGCACCTACTCCTCAGAAACTTGCATATGAAAAAAAGCAGAATGACCAGCGCAGTACTGTTAACTGTTCTGATTCCTTGCTTTCCAAATTAAATAAAAGTCAAGATGTTTTCAGTCCATCACATAAAACTACACGATTTGGGACATTATTTGAAAGATTAAACAGTCTAGGAAATAGGAATTTACTTACTAAAAGCCCTGCTGTAATTATGGATGAAGATTGTAGAAGCACGGATGAAATAAGACAGTCAGACTACATTACTGAAAAACACTCAATACAGCATATTTGGGGGAAAAATGGAAAGGAAGTTTCAAATTTTCTTGAAGATGTGAACCAGTCTACTCCTAACCTTCTATCAGAGAATTGTGACTCTTTTGTTAGTCAAAATATGATCAATGTATTAAACATAGATGAGCAAAGGATAAAGAAAACATTTAACAAGTGTGATTATGATAGTATGGGAGATACTTGTGTAGTCACTAGTTCTGATAAAAACCATGTCACTGACAGATGCATTAGAAACATTTTTACAGTTCCAGAGTTGACTTTTAGTAATTCGACTTTGAATAAAACAAGTTATCCAGAAAAATGTCAGCCAAACAAGAAGTATCAGAGAGAGTATAACAAAAATGAAAGAAATGATCTTAGTACATCTTTTGAGAACGATTACTACCCAAGCAGCTCTGAAAGAAAAGAAAAATTTGAAAATGATTACCAAGAGAAGACACCACAGAAAAGTATTCAGAAATATCCAGCAAACTCTATGGGAAATATACCTTCGGAAGAATTGCACTCTAAGCAGTCATGGGACTTTGGACTTGATGAGATTCTGATGGAAGAAGGAGGAATATATTCTTTAAAAAGCAAGCGAATATCTACTAAGAAAATCTGTCAGTATAACTGTATAAGTTAA
Amino sequence
MNWVGGSRSRVLIKQERRKQKEYFEKHRLKSKMKSLGVLSPVKNSAVSLDILNLYMVNQISCKKKIPETVRKPTHVNMNRDIKMPLRKHNLELTMSPHCVPSKLCLDDTETNVNCQRLSSKEDLGPVQSQGMDSYSMLHPQFSKIENCSFTPSSFSVELPSNRHISKLNFTSGIAPTPQKLAYEKKQNDQRSTVNCSDSLLSKLNKSQDVFSPSHKTTRFGTLFERLNSLGNRNLLTKSPAVIMDEDCRSTDEIRQSDYITEKHSIQHIWGKNGKEVSNFLEDVNQSTPNLLSENCDSFVSQNMINVLNIDEQRIKKTFNKCDYDSMGDTCVVTSSDKNHVTDRCIRNIFTVPELTFSNSTLNKTSYPEKCQPNKKYQREYNKNERNDLSTSFENDYYPSSSERKEKFENDYQEKTPQKSIQKYPANSMGNIPSEELHSKQSWDFGLDEILMEEGGIYSLKSKRISTKKICQYNCIS*