ENST00000619890.1 SSX4B
Information
- Transcript ID
- ENST00000619890.1
- Genome
- hg38
- Position
- chrX:48,402,082-48,411,910
- Strand
- -
- CDS length
- 462
- Amino acid length
- 154
- Gene symbol
- SSX4B
- Gene type
- protein-coding
- Gene description
- SSX family member 4B
- Gene Entrez Gene ID
- 548313
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 48,402,082 | 48,402,669 |
| 6 | 48,403,452 | 48,403,556 |
| 5 | 48,408,065 | 48,408,114 |
| 4 | 48,409,978 | 48,410,073 |
| 3 | 48,410,750 | 48,410,864 |
| 2 | 48,411,304 | 48,411,392 |
| 1 | 48,411,862 | 48,411,910 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 48,402,643 | 48,402,669 |
| 6 | CDS | 48,403,452 | 48,403,556 |
| 5 | CDS | 48,408,065 | 48,408,114 |
| 4 | CDS | 48,409,978 | 48,410,073 |
| 3 | CDS | 48,410,750 | 48,410,864 |
| 2 | CDS | 48,411,304 | 48,411,372 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chrX | 48,261,524 | 48,271,355 | Link |
CDS sequence
ATGAACGGAGACGACGCCTTTGCAAGGAGACCCAGGGATGATGCTCAAATATCAGAGAAGTTACGAAAGGCCTTCGATGATATTGCCAAATACTTCTCTAAGAAAGAGTGGGAAAAGATGAAATCCTCGGAGAAAATCGTCTATGTGTATATGAAGCTAAACTATGAGGTCATGACTAAACTAGGTTTCAAGGTCACCCTCCCACCTTTCATGCGTAGTAAACGGGCTGCAGACTTCCACGGGAATGATTTTGGTAACGATCGAAACCACAGGAATCAGGTTGAACGTCCTCAGATGACTTTCGGCAGCCTCCAGAGAATCTTCCCGAAGGACCCAAAAGGGGGAAACATGCCTGGACCCACAGACTGCGTGAGAGAAAGCAGCTGGTGGTTTATGAAGAGATCAGCGACCCTGAGGAAGATGACGAGTAACTCCCCTCGGGGATATGACACATGCCCATGA
Amino sequence
MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKDPKGGNMPGPTDCVRESSWWFMKRSATLRKMTSNSPRGYDTCP*