ENST00000380097.8 TRIM6

Information
Transcript ID
ENST00000380097.8
Genome
hg38
Position
chr11:5,596,637-5,612,952
Strand
+
CDS length
1,551
Amino acid length
517
Gene symbol
TRIM6
Gene type
protein-coding
Gene description
tripartite motif containing 6
Gene Entrez Gene ID
117854
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 5,596,637 5,596,914
2 5,603,246 5,603,735
3 5,604,534 5,604,629
4 5,605,337 5,605,567
5 5,608,372 5,608,394
6 5,610,145 5,610,245
7 5,610,535 5,610,561
8 5,610,777 5,612,952
CDS
Exon number Type Start Stop
1 CDS 5,596,898 5,596,914
2 CDS 5,603,246 5,603,735
3 CDS 5,604,534 5,604,629
4 CDS 5,605,337 5,605,567
5 CDS 5,608,372 5,608,394
6 CDS 5,610,145 5,610,245
7 CDS 5,610,535 5,610,561
8 CDS 5,610,777 5,611,342
Other genome
Genome Chromosome Start End Links
hg19 chr11 5,617,867 5,634,182 Link
CDS sequence
ATGTGCGGGTCAGAGAGGATTCTACAGGCAGGAAACATCTTAGAAATCAGGGTTGGGCAGGCAGGAGCCAGGAGAGTAGCTACAATGACTTCACCAGTACTGGTGGACATACGAGAAGAGGTGACCTGCCCTATCTGCCTGGAGCTCCTAACAGAACCCCTGAGCATAGACTGTGGCCACAGCTTCTGCCAAGCCTGCATCACACCAAATGGCAGGGAATCAGTGATTGGTCAAGAAGGGGAAAGAAGCTGCCCTGTGTGCCAGACCAGCTACCAGCCAGGGAACCTGCGGCCTAATCGGCATCTGGCCAACATAGTGAGGCGGCTCAGAGAGGTAGTGTTGGGCCCTGGGAAGCAGCTGAAAGCAGTTCTTTGTGCAGACCATGGAGAAAAACTGCAGCTCTTCTGTCAGGAGGATGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCGTGGAGGAGGTTGCCCAGGAGTACCAGGAGAAGTTTCAGGAGTCTCTAAAGAAGCTGAAGAACGAGGAGCAGGAAGCTGAGAAGCTAACAGCTTTTATCAGAGAGAAGAAAACATCCTGGAAGAATCAGATGGAGCCTGAGAGATGCAGGATCCAGACAGAGTTTAATCAGCTGCGAAATATCCTAGACAGAGTGGAGCAACGGGAGCTGAAAAAGCTGGAACAGGAAGAGAAGAAGGGGCTACGAATTATAGAAGAGGCTGAGAATGATCTGGTCCACCAGACCCAGTCGCTGCGAGAGCTCATCTCGGATCTGGAGCGTCGATGTCAGGGGTCAACAATGGAGCTGCTGCAGGATGTGAGTGATGTCACAGAAAGGAGTGAGTTCTGGACCCTGAGGAAGCCAGAAGCTCTCCCTACAAAGCTGAGAAGTATGTTCCGAGCCCCAGATCTGAAAAGGATGCTGCGAGTGTGTAGAGAGCTGACAGATGTCCAAAGCTACTGGGTTGACGTGACCCTGAATCCACACACAGCTAATTTAAATCTTGTCCTGGCTAAAAACCGGAGACAAGTGAGGTTTGTGGGAGCTAAAGTATCTGGACCTTCCTGTCTGGAAAAGCATTATGACTGTAGTGTCCTGGGCTCCCAGCACTTCTCCTCTGGTAAGCATTACTGGGAGGTAGATGTGGCCAAGAAGACTGCCTGGATCCTGGGGGTATGCAGCAATTCACTGGGACCTACATTCTCTTTCAACCATTTTGCTCAAAATCACAGTGCTTACTCCAGGTATCAGCCTCAGAGTGGATACTGGGTGATTGGGTTACAGCATAACCATGAATATAGGGCCTATGAGGATTCTTCCCCTTCCCTGCTTCTCTCCATGACAGTGCCCCCTCGCCGTGTTGGGGTTTTCTTAGATTATGAGGCTGGTACTGTCTCCTTTTATAATGTCACAAACCATGGCTTCCCCATCTACACTTTCTCTAAATATTACTTTCCCACTACTCTTTGTCCATATTTTAATCCTTGCAACTGTGTAATTCCTATGACCCTGCGTCGTCCAAGCTCTTGA
Amino sequence
MCGSERILQAGNILEIRVGQAGARRVATMTSPVLVDIREEVTCPICLELLTEPLSIDCGHSFCQACITPNGRESVIGQEGERSCPVCQTSYQPGNLRPNRHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGKVICWLCERSQEHRGHHTFLVEEVAQEYQEKFQESLKKLKNEEQEAEKLTAFIREKKTSWKNQMEPERCRIQTEFNQLRNILDRVEQRELKKLEQEEKKGLRIIEEAENDLVHQTQSLRELISDLERRCQGSTMELLQDVSDVTERSEFWTLRKPEALPTKLRSMFRAPDLKRMLRVCRELTDVQSYWVDVTLNPHTANLNLVLAKNRRQVRFVGAKVSGPSCLEKHYDCSVLGSQHFSSGKHYWEVDVAKKTAWILGVCSNSLGPTFSFNHFAQNHSAYSRYQPQSGYWVIGLQHNHEYRAYEDSSPSLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPTTLCPYFNPCNCVIPMTLRRPSS*