ENST00000397671.1 CPSF4L
Information
- Transcript ID
- ENST00000397671.1
- Genome
- hg38
- Position
- chr17:73,249,793-73,262,352
- Strand
- -
- CDS length
- 459
- Amino acid length
- 153
- Gene symbol
- CPSF4L
- Gene type
- protein-coding
- Gene description
- cleavage and polyadenylation specific factor 4 like
- Gene Entrez Gene ID
- 642843
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 73,249,793 | 73,250,291 |
| 6 | 73,250,973 | 73,251,107 |
| 5 | 73,252,630 | 73,252,726 |
| 4 | 73,253,931 | 73,254,026 |
| 3 | 73,257,681 | 73,257,833 |
| 2 | 73,260,933 | 73,260,983 |
| 1 | 73,262,109 | 73,262,352 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 73,250,276 | 73,250,291 |
| 6 | CDS | 73,250,973 | 73,251,107 |
| 5 | CDS | 73,252,630 | 73,252,726 |
| 4 | CDS | 73,253,931 | 73,254,026 |
| 3 | CDS | 73,257,681 | 73,257,795 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr17 | 71,245,932 | 71,258,491 | Link |
CDS sequence
ATGGTGGTATGCAAGCACTGGCTCCGGGGGCTCTGCAAGAAGGGTGATCACTGCAAGTTCCTGCACCAGTATGACCTCACCAGGATGCCTGAGTGCTACTTCTACTCCAAGTTTGGTGACTGCAGCAACAAGGAGTGTTCCTTCCTCCATGTGAAGCCAGCTTTCAAGTCCCAGGACTGTCCTTGGTATGACCAAGGTTTCTGCAAGGACGCAGGTCCTCTGTGTAAATACCGCCATGTCCCCAGAATAATGTGTCTCAACTATTTAGTTGGCTTCTGCCCCGAGGGACCCAAGTGCCAATTTGCTCACTGTAGCTTGCCAGCCGGCCCCGGGATTCAGCACCTCCTATTTCTGCTGTGGAAGCTTGGAAACCCCCATCCCCAACAGAGTGCCTGCTCTCCTGCCTGGGGATCAGGGGTCAAGGGCAGGGCCTGTGCCACAGGGCCATTATGCCAGTAA
Amino sequence
MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDAGPLCKYRHVPRIMCLNYLVGFCPEGPKCQFAHCSLPAGPGIQHLLFLLWKLGNPHPQQSACSPAWGSGVKGRACATGPLCQ*