ENST00000557644.5 NEDD1

Information
Transcript ID
ENST00000557644.5
Genome
hg38
Position
chr12:96,907,466-96,952,270
Strand
+
CDS length
2,004
Amino acid length
668
Gene symbol
NEDD1
Gene type
protein-coding
Gene description
NEDD1 gamma-tubulin ring complex targeting factor
Gene Entrez Gene ID
121441
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 96,907,466 96,907,624
2 96,909,752 96,909,895
3 96,912,723 96,912,817
4 96,917,621 96,917,737
5 96,919,985 96,920,125
6 96,934,976 96,935,205
7 96,936,611 96,936,812
8 96,937,198 96,937,393
9 96,940,409 96,940,537
10 96,942,577 96,942,624
11 96,943,560 96,943,762
12 96,944,639 96,944,795
13 96,945,693 96,945,849
14 96,951,432 96,951,498
15 96,951,949 96,952,270
CDS
Exon number Type Start Stop
1 CDS 96,907,612 96,907,624
2 CDS 96,909,752 96,909,895
3 CDS 96,912,723 96,912,817
4 CDS 96,917,621 96,917,737
5 CDS 96,919,985 96,920,125
6 CDS 96,934,976 96,935,205
7 CDS 96,936,611 96,936,812
8 CDS 96,937,198 96,937,393
9 CDS 96,940,409 96,940,537
10 CDS 96,942,577 96,942,624
11 CDS 96,943,560 96,943,762
12 CDS 96,944,639 96,944,795
13 CDS 96,945,693 96,945,849
14 CDS 96,951,432 96,951,498
15 CDS 96,951,949 96,952,053
Other genome
Genome Chromosome Start End Links
hg19 chr12 97,301,244 97,346,048 Link
CDS sequence
ATGCATTTTACAGGCGCAGTCATGCAGGAAAACCTCAGATTTGCTTCATCAGGAGATGATATTAAAATATGGGATGCTTCATCTATGACATTGGTGGATAAATTCAACCCACACACATCACCACATGGAATCAGCTCAATATGTTGGAGCAGCAATAATAACTTTTTAGTAACAGCATCTTCCAGTGGCGACAAAATAGTTGTCTCAAGTTGCAAATGTAAACCTGTTCCACTTTTAGAGCTTGCTGAAGGGCAAAAGCAGACATGTGTCAATTTAAATTCTACATCTATGTATTTGGTAAGCGGAGGCCTAAATAACACTGTTAATATTTGGGATTTAAAATCAAAAAGAGTTCATCGATCTCTTAAGGATCATAAAGATCAAGTAACTTGTGTAACATACAATTGGAATGATTGCTACATTGCTTCTGGATCTCTTAGTGGTGAAATTATTTTACACAGTGTAACCACTAATTTATCTAGTACTCCTTTTGGCCATGGTAGTAACCAGTCTGTTCGGCACTTGAAGTACTCCTTGTTTAAGAAATCACTACTGGGCAGTGTTTCGGATAATGGAATAGTAACTCTCTGGGATGTAAATAGTCAGAGTCCATACCATAACTTTGACAGTGTACACAAAGCTCCAGCGTCAGGCATCTGTTTTTCTCCTGTCAATGAATTGCTCTTTGTAACCATAGGCTTGGATAAAAGAATCATCCTCTATGACACTTCAAGTAAGAAGCTAGTGAAAACTTTAGTGGCTGACACTCCTCTAACTGCGGTAGATTTCATGCCTGATGGAGCCACTTTGGCTATTGGATCTTCCCGGGGGAAAATATATCAATATGATTTAAGAATGTTGAAATCACCAGTTAAGACCATCAGTGCTCACAAGACATCTGTGCAGTGTATAGCATTTCAGTACTCCACTGTTCTTACTAAGTCAAGTTTAAATAAAGGCTGTTCAAATAAGCCCACAACAGTGAACAAACGAAGTGTTAATGTGAATGCTGCTAGTGGAGGAGTTCAGAATTCCGGAATTGTCAGAGAAGCACCTGCCACGTCCATTGCCACAGTTCTACCACAACCTATGACATCAGCTATGGGGAAAGGAACAGTTGCTGTTCAAGAAAAAGCAGGTTTGCCTCGAAGCATAAACACAGACACTTTATCTAAGGAAACAGACAGTGGAAAAAATCAGGATTTCTCCAGCTTTGATGATACTGGGAAAAGTAGTTTAGGTGACATGTTCTCACCTATCAGAGATGATGCTGTAGTTAACAAGGGAAGTGATGAGTCCATAGGCAAAGGAGATGGCTTTGACTTTCTACCGCAGTTGAACTCAGTGTTTCCTCCAAGAAAAAATCCAGTAACTTCAAGTACTTCAGTATTGCATTCTAGTCCTCTTAATGTTTTTATGGGATCTCCAGGGAAAGAGGAAAATGAAAACCGTGATCTAACAGCTGAGTCTAAGAAAATATATATGGGAAAACAGGAATCTAAAGACTCCTTCAAACAGTTAGCAAAGTTGGTCACATCTGGTGCTGAAAGTGGAAATCTAAATACCTCTCCATCATCTAACCAAACAAGAAATTCTGAGAAATTTGAAAAGCCAGAGAATGAAATTGAAGCCCAGTTGATATGTGAACCCCCAATCAATGGATCCTCAACTCCAAATCCAAAGATAGCATCTTCTGTCACTGCTGGAGTTGCCAGTTCACTCTCAGAAAAAATAGCCGACAGCATTGGAAATAACCGGCAAAATGCACCATTGACTTCCATTCAAATTCGTTTTATTCAGAACATGATACAGGAAACGTTGGATGACTTTAGAGAAGCATGCCATAGGGACATTGTGAATTTGCAAGTGGAGATGATTAAACAGTTTCATATGCAACTGAATGAAATGCATTCTTTGCTGGAAAGATACTCAGTGAATGAAGGTTTAGTGGCTGAAATTGAAAGACTACGAGAAGAAAACAAAAGATTACGGGCCCACTTTTGA
Amino sequence
MHFTGAVMQENLRFASSGDDIKIWDASSMTLVDKFNPHTSPHGISSICWSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAASGGVQNSGIVREAPATSIATVLPQPMTSAMGKGTVAVQEKAGLPRSINTDTLSKETDSGKNQDFSSFDDTGKSSLGDMFSPIRDDAVVNKGSDESIGKGDGFDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQESKDSFKQLAKLVTSGAESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPINGSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNEGLVAEIERLREENKRLRAHF*